Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04461 and BPUM_2703
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence dna-align/BSNT_04461___dps.1.24716.seq
# -bsequence dna-align/BPUM_2703___dpsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04461___dps-BPUM_2703___dpsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04461___dps-BPUM_2703___dpsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04461___dps
# 2: BPUM_2703___dpsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 334/447 (74.7%)
# Similarity: 334/447 (74.7%)
# Gaps: 18/447 ( 4.0%)
# Score: 1205.0
#
#
#=======================================
BSNT_04461___ 1 ATGTCAGAACAATTGATT-CAAGCAGTGAACAAACAAGTAGCCAACTGGA 49
|||||.|||.|||| ||| ||.|..||.||.|||||||||||..|.||||
BPUM_2703___d 1 ATGTCTGAAAAATT-ATTACACGTCGTCAATAAACAAGTAGCAGATTGGA 49
BSNT_04461___ 50 CAGTCATGTATGTGAAACTACATAATTATCACTGGTATGTGAAAGGG-AA 98
|.||..|.||.||.|||.|||||||.|||||||||||.|| |||||| ||
BPUM_2703___d 50 CTGTGCTTTACGTAAAATTACATAACTATCACTGGTACGT-AAAGGGAAA 98
BSNT_04461___ 99 AGATTTCTTCACTCTTCATGAAAAGTTTGAGGAGCTGTACAACGAAACGG 148
|||.|||||.||.||.|||||.||.||||||||.||.||.|..|||||.|
BPUM_2703___d 99 AGACTTCTTTACACTCCATGAGAAATTTGAGGAACTTTATACAGAAACAG 148
BSNT_04461___ 149 CAACTTATATTGATGACTTAGCAGAACGTCTTTTGGCGCTGAACGGAAAA 198
|.||.||.||||||||.||.||.||.|||.|..|.|||.|.||.|||.||
BPUM_2703___d 149 CGACATACATTGATGATTTGGCTGAGCGTATGCTTGCGTTAAATGGACAA 198
BSNT_04461___ 199 CCGATTGCAACAATGAAGGAATCCTTAGAAACGGCTTCTGTCA---AAGA 245
||..||||.||||||||.||||.|||||||| .||||..|| ||||
BPUM_2703___d 199 CCTGTTGCGACAATGAAAGAATGCTTAGAAA---TTTCTAGCATTCAAGA 245
BSNT_04461___ 246 AGCTGCTGGAAATGAAACAGCTGAACAAATGGTTCAAAGCGTATATGATG 295
|||||..|||||||||.||||.||.||||||||..|||...|||||||||
BPUM_2703___d 246 AGCTGAAGGAAATGAATCAGCGGAGCAAATGGTGAAAAATCTATATGATG 295
BSNT_04461___ 296 ATTTCACAGTC----ATCGCGGAAGAGCTGAAAAACGGCATGGATTTAGC 341
||||| || ||.||.|||||..|.||..|.||.|||||..|.||
BPUM_2703___d 296 ATTTC----TCCAATATTGCTGAAGAATTAAAGCAAGGAATGGAGCTGGC 341
BSNT_04461___ 342 TGATGAAGTCGGTGACGAAACAACAGGGGACATGCTTCTTGCGATCCATC 391
||..|||||.||.||.||||||||.||.||.|||||.|||||.||.||||
BPUM_2703___d 342 TGGAGAAGTTGGCGATGAAACAACCGGTGATATGCTGCTTGCAATTCATC 391
BSNT_04461___ 392 AAAATATTGAAAAACATAACTGGATGCTAAAAGCTTACCTAGGTTAA 438
||..||||||.|||||.|||||||||||.|||||.||..||||||||
BPUM_2703___d 392 AATCTATTGAGAAACACAACTGGATGCTTAAAGCATATTTAGGTTAA 438
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