Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04465 and BPUM_2705

See Amino acid alignment / Visit BSNT_04465 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence dna-align/BSNT_04465___luxS.1.24716.seq
#    -bsequence dna-align/BPUM_2705___luxS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04465___luxS-BPUM_2705___luxS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04465___luxS-BPUM_2705___luxS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04465___luxS
# 2: BPUM_2705___luxS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:     381/474 (80.4%)
# Similarity:   381/474 (80.4%)
# Gaps:           0/474 ( 0.0%)
# Score: 1533.0
# 
#
#=======================================

BSNT_04465___      1 ATGCCTTCAGTAGAAAGTTTTGAGCTTGATCATAATGCGGTTGTTGCTCC     50
                     |||||||||||.|||||.|||||.||||||||||||||.||....||.||
BPUM_2705___l      1 ATGCCTTCAGTTGAAAGCTTTGAACTTGATCATAATGCTGTAAAAGCGCC     50

BSNT_04465___     51 ATATGTAAGACATTGCGGCGTGCATAAAGTGGGAACAGACGGCGTTGTAA    100
                     |||.||..|.|||||.|||||.||||||||||||.||||.||.|..||.|
BPUM_2705___l     51 ATACGTTCGTCATTGTGGCGTTCATAAAGTGGGATCAGATGGAGAAGTCA    100

BSNT_04465___    101 ATAAATTTGACATTCGTTTTTGCCAGCCAAATAAACAGGCGATGAAGCCT    150
                     ||||||||||.|||||||||||.||||||||.|||||.||.|||||.|||
BPUM_2705___l    101 ATAAATTTGATATTCGTTTTTGTCAGCCAAACAAACAAGCAATGAAACCT    150

BSNT_04465___    151 GACACCATTCACACACTCGAGCATTTGCTCGCGTTTACGATTCGTTCTCA    200
                     ||.||.|||||.|||.|.||||||||.||.|||||||..|||.|..|.||
BPUM_2705___l    151 GATACGATTCATACATTAGAGCATTTACTTGCGTTTAACATTAGAACACA    200

BSNT_04465___    201 TGCTGAGAAATACGATCATTTTGATATCATTGATATTTCTCCAATGGGCT    250
                     ..|.||||||||.|||||||||||||||||||||||||||||||||||||
BPUM_2705___l    201 CTCAGAGAAATATGATCATTTTGATATCATTGATATTTCTCCAATGGGCT    250

BSNT_04465___    251 GCCAGACAGGCTATTATCTAGTTGTGAGCGGAGAGCCGACATCAGCGGAA    300
                     |.|||||||||||.|||.||||.||.||.||.|..||.||..|||..|||
BPUM_2705___l    251 GTCAGACAGGCTACTATTTAGTGGTCAGTGGTGCACCAACTCCAGAAGAA    300

BSNT_04465___    301 ATCGTTGATCTGCTTGAAGACACAATGAAGGAAGCGGTAGAGATTACAGA    350
                     ||||||||.||.|||||.|..|||.|.|||||.||.||.|||.|.|||||
BPUM_2705___l    301 ATCGTTGAACTTCTTGATGCAACATTCAAGGATGCAGTTGAGGTAACAGA    350

BSNT_04465___    351 AATACCAGCTGCGAATGAAAAGCAGTGCGGCCAAGCGAAGCTTCATGATC    400
                     .||.||.|||||.||.|||.||||.|||||.||||||||.||||||||.|
BPUM_2705___l    351 GATTCCTGCTGCAAACGAAGAGCAATGCGGTCAAGCGAAACTTCATGACC    400

BSNT_04465___    401 TGGAAGGTGCTAAACGTTTAATGCGTTTCTGGCTTTCACAGGATAAAGAA    450
                     |.|||||.||.||||||||.|||||||||||||||||.||.|||.|||||
BPUM_2705___l    401 TTGAAGGGGCAAAACGTTTGATGCGTTTCTGGCTTTCTCAAGATCAAGAA    450

BSNT_04465___    451 GAATTGTTAAAAGTATTTGGCTAA    474
                     ||..|..|.|||||||||||.|||
BPUM_2705___l    451 GAGCTTCTCAAAGTATTTGGTTAA    474


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