Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02155 and BPUM_2751

See Amino acid alignment / Visit BSNT_02155 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence dna-align/BSNT_02155___xkdT.1.24716.seq
#    -bsequence dna-align/BPUM_2751___xkdT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02155___xkdT-BPUM_2751___xkdT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02155___xkdT-BPUM_2751___xkdT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02155___xkdT
# 2: BPUM_2751___xkdT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1138
# Identity:     708/1138 (62.2%)
# Similarity:   708/1138 (62.2%)
# Gaps:         179/1138 (15.7%)
# Score: 2019.0
# 
#
#=======================================

BSNT_02155___      1 ATGTTTGAAGATCAGACTTTTGAAGCGATTATGGAGCGTATGCTGAACAG     50
                     ||||||||.||.||.||.|..|||||..|.|||||..|.|||||..||||
BPUM_2751___x      1 ATGTTTGAGGAACAAACGTACGAAGCACTCATGGAAAGAATGCTAGACAG     50

BSNT_02155___     51 CATTTCCGCAGAT---ATTGACACAAGAGAAGGCAGCGTCATTTATAATG     97
                      |.|.|  |||||   ||.||.|.|||||||..|||||||||||..||||
BPUM_2751___x     51 -ACTGC--CAGATGACATAGATAAAAGAGAAAACAGCGTCATTTGGAATG     97

BSNT_02155___     98 CGTTAGCCCCGGCGGCGGCCGAGCTTGCGAAGTCTTATATATGGCTGGAT    147
                     |.||.||.||.||.||.||.||..|.||..||||.|||||.|||||.|||
BPUM_2751___x     98 CCTTGGCACCTGCTGCCGCTGAATTGGCACAGTCCTATATTTGGCTTGAT    147

BSNT_02155___    148 ACTGTGCTTGAGCTCGTTTTTTCTGATACCGCACAAGGCGAATTTTTAGA    197
                     ...||..|.|||||.||.|||.|.|||||.||||||||.||.||||||||
BPUM_2751___x    148 CAAGTATTCGAGCTGGTCTTTGCAGATACAGCACAAGGAGAGTTTTTAGA    197

BSNT_02155___    198 CAGGCGTGCAGCGGAAGCGGGAATTGAACGGACAGCCGCGACAAAGGCGG    247
                     .||.||.||.||.||||..|||||||||.|.|.|.|.||.||.||.||||
BPUM_2751___x    198 TAGACGGGCTGCTGAAGTAGGAATTGAAAGAAAACCAGCAACTAAAGCGG    247

BSNT_02155___    248 T--------------------CAGAGCGGGAGAGTTTACATCTGGAGTTA    277
                     |                    ||||   |||.| |..|||||        
BPUM_2751___x    248 TTTGGTCCGTAGCCATTCAGCCAGA---GGATA-TCAACATC--------    285

BSNT_02155___    278 CTATTCCTGTCGGCTCCCGCTTTTACGTGGATAATCTTTATTTTCAATAT    327
                          ||.|..||||||||.||||...|.||..|..|.|||||.||||||
BPUM_2751___x    286 -----CCAGCTGGCTCCCGGTTTTTTATTGAAGACGTCTATTTCCAATAT    330

BSNT_02155___    328 ACGGCAGACGGGACACTCATCTGTGAAACACCTGGTGAAG-CAGGAAACG    376
                     .||...||.||.||.||....||.||.||||||||..||| |.|.||..|
BPUM_2751___x    331 TCGAACGATGGCACGCTAGAATGCGAGACACCTGGCAAAGTCGGCAATGG    380

BSNT_02155___    377 CCAAT---CTGACCGGACGCAATTTACTGTCATTGGATACCATTCCCGGT    423
                     .||||   |.||.|.|.|||    |.||.|||.|.|||||.|||||.||.
BPUM_2751___x    381 TCAATTAACAGATCAGCCGC----TGCTTTCACTTGATACAATTCCGGGG    426

BSNT_02155___    424 TTAGAAACGGCCATAGTCAAAGAAATCCTGATTCCGGGACGCGAGGAAGA    473
                     .|.|||.|....||..|.|||||..|..||||.||.||||..||||||||
BPUM_2751___x    427 CTTGAATCAATTATCATGAAAGATTTGGTGATACCCGGACAAGAGGAAGA    476

BSNT_02155___    474 GGGAGATGACAGCTTGCG-----AGAACGGTATTTTACAAGGGTTCGGCG    518
                        ||||||| |||| ||     .||.||.||.||.|.|.|.|.|.||||
BPUM_2751___x    477 ---AGATGAC-GCTT-CGTTATACGATCGTTACTTAATACGTGCTAGGCG    521

BSNT_02155___    519 TGAGGCCGTCAGTGCCAATAAAATGCATTATAAAGAGTGGGCTGAGGAAG    568
                     .|||||.|||||||||||.||...|||.||||||.|.|||||||||||||
BPUM_2751___x    522 GGAGGCTGTCAGTGCCAACAAGGCGCACTATAAAAAATGGGCTGAGGAAG    571

BSNT_02155___    569 TGGACGGTG-TGGGAAAGGCAAAGATCTTCCCGCTTTGGAACGGTGAAGG    617
                     |||..|||| |||.|.||..|||| |.||||||||||||||.||.|||||
BPUM_2751___x    572 TGGCAGGTGTTGGCAGAGCGAAAG-TATTCCCGCTTTGGAATGGAGAAGG    620

BSNT_02155___    618 CACGGTCAAAATTGTCGTCAC-GAATGCGAATCTTGAGCCCGC-----TT    661
                     |||.||||||||||||.|||| ||..|| |||||.||...|||     .|
BPUM_2751___x    621 CACAGTCAAAATTGTCATCACAGACGGC-AATCTAGATATCGCATCAGAT    669

BSNT_02155___    662 CTCCTATTTTAATTCAAAAAGTGAAAGATTATATCGACCCTGAACCAGGG    711
                     ||.|| |.|||    |||.|||..|.||.|||||.|||||.|..|||||.
BPUM_2751___x    670 CTGCT-TGTTA----AAAGAGTACAGGAATATATTGACCCAGTGCCAGGC    714

BSNT_02155___    712 CAGGGAGAGGGACAGGCGCCAATCGG------AGCCGTTGTCACAGTGGA    755
                     .|.|||||.|||||.|||||.|||||      |||      .||.||.||
BPUM_2751___x    715 GAAGGAGAAGGACAAGCGCCTATCGGTTCAAAAGC------GACCGTCGA    758

BSNT_02155___    756 AAGCGCGGTCTGGAAGGAAGTTGAGATTTCTGCCGAAGT-GCTCCCTGAG    804
                     ||||||....|||..|||..||||.||      .||||| ||       |
BPUM_2751___x    759 AAGCGCCAAATGGCTGGACATTGACAT------AGAAGTAGC-------G    795

BSNT_02155___    805 ATCAATCAC-TCAA-------------TTGATGAAGTGAAGTCAGAAATT    840
                     .||.|  || ||||             ||||.|.||.|.||..||||||.
BPUM_2751___x    796 GTCGA--ACTTCAAATGGACTGGACCCTTGAAGGAGCGCAGAAAGAAATA    843

BSNT_02155___    841 GAGG--------AAGGCG-TTTTG-AATCTCTTTAAGAAAATGGCGTTTG    880
                     ||.|        ||.||| |.||| ||||          |||.||.||||
BPUM_2751___x    844 GAAGAAAAGGTCAAAGCGCTGTTGAAATC----------AATCGCATTTG    883

BSNT_02155___    881 AAGATAACGT--CA--------TCCGCCTTTCTCAAATTAACAATATCGT    920
                     ||.|.|  ||  ||        |||||.||    ||||.|          
BPUM_2751___x    884 AAAAGA--GTACCATTCGAATGTCCGCATT----AAATGA----------    917

BSNT_02155___    921 CTATAATTCACCA-TCAGTCAGT------GACTACTCCAA---TATTCAA    960
                      |||..|..|||| ||||..|||      ||.|| |.|||   ||||  |
BPUM_2751___x    918 -TATTTTGTACCATTCAGAAAGTGTATCAGATTA-TGCAAACGTATT--A    963

BSNT_02155___    961 ATCAACGGCACGTCTGAAAATCTGGTGCTG-AGCGACGTGGAAATTCCTA   1009
                     .|.||.||...|||..||||..|.||..|| || |||.|.||.||.||..
BPUM_2751___x    964 TTGAATGGGGAGTCAAAAAACTTAGTATTGCAG-GACATTGAGATACCGC   1012

BSNT_02155___   1010 AGCTTGGGCAGGTGAAGATCATTGAGCAAACAAGATGA   1047
                     ..||..|||||||||||.|.||||||||||||.|||||
BPUM_2751___x   1013 GTCTGAGGCAGGTGAAGGTTATTGAGCAAACAGGATGA   1050


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