Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02130 and BPUM_2770

See Amino acid alignment / Visit BSNT_02130 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence dna-align/BSNT_02130___xtmB.1.24716.seq
#    -bsequence dna-align/BPUM_2770___yqaT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02130___xtmB-BPUM_2770___yqaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02130___xtmB-BPUM_2770___yqaT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02130___xtmB
# 2: BPUM_2770___yqaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1403
# Identity:     938/1403 (66.9%)
# Similarity:   938/1403 (66.9%)
# Gaps:         190/1403 (13.5%)
# Score: 2922.5
# 
#
#=======================================

BSNT_02130___      1 ---------ATGATTGTAAAAGAAATCAACCCTCATTTCGAAGA-TTACG     40
                              .||||||.|||||||.||||.|||||.||.|||.| ||.| 
BPUM_2770___y      1 ATGACGAAGTTGATTGAAAAAGAAGTCAATCCTCACTTTGAACACTTTC-     49

BSNT_02130___     41 TGTTCAATTGGGAGCAGACGTACCAGTTTCTTGTCGGCGGCTACGGCTCA     90
                     |.|||.|||||.|.||||.||..||.|||.|.||.||||||||||||||.
BPUM_2770___y     50 TATTCGATTGGAATCAGAAGTTTCAATTTTTAGTAGGCGGCTACGGCTCC     99

BSNT_02130___     91 TCCAAAAGCTATCATACCGCATTGAAAATCGTGCTAAAGCTGCTGAAGGA    140
                     ||.|||||||||||.|..||.||.|||.|..|..|||||.|.|||.|.||
BPUM_2770___y    100 TCGAAAAGCTATCACATTGCGTTAAAACTTATTTTAAAGTTACTGGAAGA    149

BSNT_02130___    141 AAAACGGACGGCCCTTGTGATCCGGGAGGTGTTCGATACCCATCGGGATT    190
                     |||.|||||.||.|||||.||.||.||.||.|..|||||.||.||.||.|
BPUM_2770___y    150 AAAGCGGACAGCACTTGTCATTCGAGAAGTATATGATACGCACCGCGAAT    199

BSNT_02130___    191 CGACCTTCGCCTTGTTTCAAGAGGTGATCG-AAGAGCTCGGTCTCACAAA    239
                     |.|||||..|..|.||.|||||   ||||| .||    ||.|||      
BPUM_2770___y    200 CAACCTTTTCTCTCTTACAAGA---GATCGTCAG----CGATCT------    236

BSNT_02130___    240 GGCCGTGGCATC--TCTT---------------TCTTCCCCGCTGCAGCT    272
                          |||||||  ||.|               ..|||.|||||     |
BPUM_2770___y    237 -----TGGCATCGATCATGTGGTGAAGTGCCGCAGTTCGCCGCT-----T    276

BSNT_02130___    273 GC---GA--TTTCACAATGGCAGCCGGATCATGTTCAAAGGAATGGACAA    317
                     ||   ||  ||||..|||||||||.|.|||.|.|||||||||.|||||||
BPUM_2770___y    277 GCCTTGACGTTTCGAAATGGCAGCAGCATCTTATTCAAAGGACTGGACAA    326

BSNT_02130___    318 TCCGGCAAAATTAAAATCGGTTCATAACATTTC-ATTAATATGGATTGAA    366
                     .||.|..|||||||||||..|..|.|||||.|| ||| ||.||||||||.
BPUM_2770___y    327 GCCTGAGAAATTAAAATCAATCAACAACATCTCGATT-ATTTGGATTGAG    375

BSNT_02130___    367 GAGTGCTCAGAGGTGAAGTATGAGGGGTTCAAGGAGTTAATCGGACGTCT    416
                     |||||.||||||||....|||||.||.||.||.|||.|..|.|||.|.||
BPUM_2770___y    376 GAGTGTTCAGAGGTTTCTTATGAAGGCTTTAAAGAGCTGCTGGGAAGGCT    425

BSNT_02130___    417 TCGCCATCCTGAGC-TAAAGCTTCATATGATCTGTA-CCACCAATCCCGT    464
                     ..|.||||| |..| ||..||||.|||||||.| || |.||||||||.||
BPUM_2770___y    426 GAGGCATCC-GTCCTTACCGCTTTATATGATGT-TATCAACCAATCCTGT    473

BSNT_02130___    465 CGGCACCTC----CAATTGGACGTATAGGCATTTTTTTCGGGATGAAC-G    509
                     .||    ||    .|||||||||||.||.|||||.|||||.||||||| |
BPUM_2770___y    474 TGG----TCAAGATAATTGGACGTACAGACATTTCTTTCGAGATGAACAG    519

BSNT_02130___    510 CAAGAAACGGTTTGTGCTGGATGACAGCGAA--CTT-TACGAAAAGCGGA    556
                     | .|||.||.|||||.||.|||||   ||||  ||| |||.||||.||.|
BPUM_2770___y    520 C-TGAAGCGATTTGTCCTAGATGA---CGAAACCTTATACAAAAAACGCA    565

BSNT_02130___    557 CGATTGT----AAAGGGAGATACGTATTACCATCATTCCACCGCTAACGA    602
                     |..||||    ||    |||||||||.||.|||||.|||||.||..|.||
BPUM_2770___y    566 CCGTTGTGATCAA----AGATACGTACTATCATCACTCCACAGCGGAAGA    611

BSNT_02130___    603 CAATCTTTTTCTCCCGGAAAGCTATCTGAAACAGCTTGACGGACTCAAAG    652
                     .||.||.||||||||..||||||||.||||.|||||.||.|.|||.||||
BPUM_2770___y    612 TAACCTATTTCTCCCTAAAAGCTATGTGAAGCAGCTGGATGAACTGAAAG    661

BSNT_02130___    653 AGTATGATCCCGACCTGTACCGGATTGCCCGCAAAGGACGA-TTCGGCGT    701
                     |.||.|||||.|||||.||.||.|||||..| .||||.|.| ||||||.|
BPUM_2770___y    662 AATACGATCCAGACCTCTATCGAATTGCGAG-GAAGGGCTATTTCGGCAT    710

BSNT_02130___    702 CAATGGGATCAGGGTGCTGCCGCAGTTCGAGGTACTCCCGCATAATCA-A    750
                     ||||||.|..|.|||..|.||.||.|||||||||      |..||||| .
BPUM_2770___y    711 CAATGGAACAAAGGTTTTTCCTCAATTCGAGGTA------CGAAATCATG    754

BSNT_02130___    751 ATGAAAAAATGTA-TCGCAGCCATCAGCAAGCCA-----ATCTTTCG-TA    793
                     .||     ||||| |.|.||||||  .|||  ||     |||.|.|| ||
BPUM_2770___y    755 CTG-----ATGTATTAGAAGCCAT--TCAA--CAGATGGATCGTCCGCTA    795

BSNT_02130___    794 -------CAGGCATGGATTTTGGATTCGAGGAATCCTATAATGCCGTCGT    836
                            |||||||||||||||||||.|..|||||.||.|||||..||.|
BPUM_2770___y    796 AAACGAGCAGGCATGGATTTTGGATTTGTTGAATCATACAATGCGCTCAT    845

BSNT_02130___    837 CCGGCTTGCTGTAGATCCTGAAAAAAAATACCTCTACATTTATTGGGAGT    886
                     .||..|.||.||.||||.|||||||||.|||.|.||.|||||.|||||.|
BPUM_2770___y    846 TCGATTAGCAGTCGATCATGAAAAAAAGTACTTATATATTTACTGGGAAT    895

BSNT_02130___    887 ATTATCAAAAC------AAAATGACAGATG-----ACAGGACGGCTGAGG    925
                     |||   |.|||      |||   |||||||     ||||  |.|.|||  
BPUM_2770___y    896 ATT---ACAACCGCGGGAAA---ACAGATGATGAAACAG--CCGTTGA--    935

BSNT_02130___    926 AGCTGCGT----GAGTTTATTGAGACACAGGAATTGATCAAAGCCGACTC    971
                          |.|    |||||.|||||..||.|||||.|.|||||||||||..|
BPUM_2770___y    936 -----CTTAAAAGAGTTCATTGAATCAAAGGAACTCATCAAAGCCGATGC    980

BSNT_02130___    972 GGCTGAGCCGAAAAGCATTCAATATTTCCGCCAGCAGGGCTTTCGGATGG   1021
                     .||.||.||.||||.||||||.||||||||.||||..||.||||..||||
BPUM_2770___y    981 AGCCGAACCTAAAACCATTCACTATTTCCGGCAGCTTGGATTTCAAATGG   1030

BSNT_02130___   1022 TTGGAGC-CAGAAAGTTTCCCGGCTCCAGGCTTCAATATACCAAAAAGGT   1070
                     |.|.||| || .|||||.|..||.||..|..|.||||||||.||||||.|
BPUM_2770___y   1031 TGGCAGCACA-TAAGTTCCAAGGTTCGCGTTTGCAATATACGAAAAAGAT   1079

BSNT_02130___   1071 AAAACGGTTCAAAAAAATCTTCTGTTCGGATCGCTGTGAAAATGTC----   1116
                     .||||||||.||.||||||.|.||.||.||| |||       ||||    
BPUM_2770___y   1080 CAAACGGTTTAAGAAAATCATTTGCTCTGAT-GCT-------TGTCCGCA   1121

BSNT_02130___   1117 ----ATCTATGAGC-TCAAGACACTTACGTATGCCAA---AGATAAAAAC   1158
                         ||||||||.| |||| .||||.||.|||   ||   ||||||..|.
BPUM_2770___y   1122 CACAATCTATGAACTTCAA-TCACTGACCTAT---AAGGCAGATAAGGAT   1167

BSNT_02130___   1159 GGA-GCTCTGATTGAGGATG-AATTCACGATTGACCCGCATACGCTTTCT   1206
                     ||| |.|..|| .||.|||| |.|||| .||.||.||||||||..|.||.
BPUM_2770___y   1168 GGACGTTTAGA-GGAAGATGCATTTCA-AATCGATCCGCATACATTATCA   1215

BSNT_02130___   1207 GCCATTTGGTATGCGCTTGATGATTATGAGGTTGCTGATATGAAAGAGAC   1256
                     |||||.|||||||||||.|||||||||||.||..|.|||.|||||.||||
BPUM_2770___y   1216 GCCATCTGGTATGCGCTGGATGATTATGAAGTGACGGATTTGAAACAGAC   1265

BSNT_02130___   1257 AGCACACA-AACGAATCCGGCCGAATCGAGAAAGGAGGAGGT-CATAA--   1302
                     .|| |.|| |.||..||||.||.||..||||   |||||||| ||||.  
BPUM_2770___y   1266 CGC-CTCAGAGCGTGTCCGTCCAAACAGAGA---GAGGAGGTCCATACAA   1311

BSNT_02130___   1302 ---   1302
                        
BPUM_2770___y   1312 TGA   1314


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