Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04625 and BPUM_2806

See Amino acid alignment / Visit BSNT_04625 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence dna-align/BSNT_04625___gspM.1.24716.seq
#    -bsequence dna-align/BPUM_2806___yugI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04625___gspM-BPUM_2806___yugI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04625___gspM-BPUM_2806___yugI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04625___gspM
# 2: BPUM_2806___yugI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity:     336/399 (84.2%)
# Similarity:   336/399 (84.2%)
# Gaps:          12/399 ( 3.0%)
# Score: 1422.5
# 
#
#=======================================

BSNT_04625___      1 ATGGCAGCAAAATTTGAAGTGGGCAGTGTTTACACTGGTAAAGTTACAGG     50
                     |||||..||||.||||||||.|||||||||||||||||||||||.|||||
BPUM_2806___y      1 ATGGCGACAAAGTTTGAAGTAGGCAGTGTTTACACTGGTAAAGTAACAGG     50

BSNT_04625___     51 ATTACAAGCGTATGGTGCGTTTGTTGCATTAGATGAAGAAACTCAAGGTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||..
BPUM_2806___y     51 ATTACAAGCGTATGGTGCGTTTGTTGCATTAGATGAAGAAACTCAAGGAC    100

BSNT_04625___    101 TAGTACACATTTCTGAAGTGACTCACGGTTTCGTAAAAGATATCAACGAG    150
                     |.||.||.|||||||||||.||.||.||.||.||||||||.|||||||||
BPUM_2806___y    101 TTGTGCATATTTCTGAAGTAACACATGGCTTTGTAAAAGACATCAACGAG    150

BSNT_04625___    151 CACCTTTCAGTTGGCGACGAAGTACAAGTAAAAGTACTTGCTGTTGATGA    200
                     |||||||||.||||.||||||||||||||||||||.|||.||||||||||
BPUM_2806___y    151 CACCTTTCAATTGGTGACGAAGTACAAGTAAAAGTTCTTTCTGTTGATGA    200

BSNT_04625___    201 AGAAAAAGGCAAAATCAGCCTTTCAATTCGTGCGACACAAGCTGCGCCTG    250
                     |.|...|||.||||||||||||||.||.|||||||||||||.|||.||.|
BPUM_2806___y    201 AAATGCAGGTAAAATCAGCCTTTCTATCCGTGCGACACAAGATGCACCAG    250

BSNT_04625___    251 AGAAAAAAGAAAGCAAACCAAGAAAACCTAAAG----CTGCTCAAGTAAG    296
                     |.|.||||||||||||.||||..||||  ||||    |.|  |||||.|.
BPUM_2806___y    251 AAAGAAAAGAAAGCAAGCCAAAGAAAC--AAAGACCACAG--CAAGTGAA    296

BSNT_04625___    297 CGAAGAAGCTTCTACACCACAAGGTTTCAACACATTAAAAGATAAGCTTG    346
                     .|||||||||.||.||||||||||||||||.|||.|.||||||||.||||
BPUM_2806___y    297 AGAAGAAGCTGCTGCACCACAAGGTTTCAATACACTTAAAGATAAACTTG    346

BSNT_04625___    347 AAGAGTGGATCGA--AATGTCCAACCGCAAAGACCTTATCAAAAAATAA    393
                     ||||||||||.||  ||  ||.|||||.|||||.||.|||||.||||||
BPUM_2806___y    347 AAGAGTGGATTGAGCAA--TCTAACCGTAAAGATCTGATCAAGAAATAA    393


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