Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04644 and BPUM_2823
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_04644___yufN.1.24716.seq
# -bsequence dna-align/BPUM_2823.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04644___yufN-BPUM_2823.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04644___yufN-BPUM_2823.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04644___yufN
# 2: BPUM_2823
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1168
# Identity: 801/1168 (68.6%)
# Similarity: 801/1168 (68.6%)
# Gaps: 128/1168 (11.0%)
# Score: 2773.5
#
#
#=======================================
BSNT_04644___ 1 ATGACTGGCCGGATCAGCTTTGAACCAAATTTTTCTGGGGGGTTATATCT 50
|
BPUM_2823 1 -------------------------------------------------T 1
BSNT_04644___ 51 TGAA----CGAAAAATCGGATTGGCGATGTCACTT-GTGATCGCAGCAGG 95
|||| ||.|||||.|||.|.||..|||| ||| ||..|.||||||||
BPUM_2823 2 TGAAGAAGCGCAAAATTGGACTAGCATTGTC-CTTAGTCGTAGCAGCAGG 50
BSNT_04644___ 96 CACCATATTAGGAGCATGCGG------------AAACAGCG--------A 125
.|||||..|.||||||||||| |||||||| |
BPUM_2823 51 AACCATCCTTGGAGCATGCGGCAACTCTGGCTCAAACAGCGGTGAAAACA 100
BSNT_04644___ 126 AAAAAGCAGCGGCTCAGGCGAAGGCAAAAACA--AATTCAGTGTGGCGAT 173
|||||| |.|||.| ||||||.|||.||.||
BPUM_2823 101 AAAAAG-------------------ATAAAGATCAATTCACTGTTGCAAT 131
BSNT_04644___ 174 GGTTACTGACGTAGGCGGAGTGGATGACAAATCCTTCAACCAATCAGCCT 223
|||.|||||.||.||.||.||.|||||||||||.||.|||||||||||.|
BPUM_2823 132 GGTAACTGATGTCGGTGGTGTCGATGACAAATCGTTTAACCAATCAGCTT 181
BSNT_04644___ 224 GGGAAGGCATCCAAGCCTTTGGGAAAGAGAATGGGCTGAAAAAAGGCAAA 273
|||||||..|.|||||.|||||.|||||.||....||.||||||||.|||
BPUM_2823 182 GGGAAGGTTTACAAGCATTTGGAAAAGACAACAATCTTAAAAAAGGTAAA 231
BSNT_04644___ 274 AACGGTTACGACTATCTT-CAATCCAAATCTGATGCAGACTATACAACGA 322
|||||.|..||.|| ||| |||||.|||||.||.||.|||||||||||.|
BPUM_2823 232 AACGGCTTTGATTA-CTTACAATCTAAATCAGACGCTGACTATACAACAA 280
BSNT_04644___ 323 ACTTAAATAAATTGGCGCGTGAGAATTTTGACTTAATTTACGGCGTCGGC 372
|||||||.|...|.||.||||||||.||.||.||.||||||||..|.||.
BPUM_2823 281 ACTTAAACACTCTTGCTCGTGAGAAATTCGATTTGATTTACGGAATTGGT 330
BSNT_04644___ 373 TACTTAATGGAGGATTCAATCAGC-GAAATTGCTGACCAGCGTAA-AAAT 420
|.|||||||||.|||.|.|| |.| ||||||||.|||||.||||| |||.
BPUM_2823 331 TTCTTAATGGAAGATGCTAT-ATCTGAAATTGCAGACCAACGTAAGAAAA 379
BSNT_04644___ 421 ACAAACTTTGCGATTATAGATGCTGTTGTCGATAAAGACAACGTCGCAAG 470
|| .|||||||.||..|.|||||.||.||..|.|||||||||||.||.||
BPUM_2823 380 AC-CACTTTGCTATCGTTGATGCAGTCGTGAAAAAAGACAACGTAGCTAG 428
BSNT_04644___ 471 TATTACGTTTAAAGAGCAGGAAGGCTCATTTCTCGTCGGAGTGGCCGCAG 520
.|||...||.||.||..|.|||||.|||||.||.||.||.||.||.||.|
BPUM_2823 429 CATTGTATTCAACGAAAACGAAGGATCATTCCTTGTGGGTGTTGCGGCTG 478
BSNT_04644___ 521 CCCTATCAAGCAAATCAGGAAAAATCGGCTTTGTAGGCGGCATGGAATCA 570
|.||.||.|..||||||...|||||.||.|||||.|||||..|.||.||.
BPUM_2823 479 CTCTTTCTACAAAATCAAACAAAATTGGTTTTGTTGGCGGTGTAGATTCT 528
BSNT_04644___ 571 GAGTTAATCAAAAAATTCGAGGTCGGCTTCCGTGCCGGCGTGCAAGCAAT 620
||.|||.|||.|||||||||.|||||.||||||||.|||||..|||||..
BPUM_2823 529 GAATTAGTCAGAAAATTCGAAGTCGGTTTCCGTGCAGGCGTTGAAGCAGC 578
BSNT_04644___ 621 TAACCCTAAAGCCGTTGTAGAAGTGAAATACGCAGGGGGTTTCGATAAAG 670
||||||.|||||....||||||||||||||.|||||.|..||||||||||
BPUM_2823 579 TAACCCGAAAGCAAAAGTAGAAGTGAAATATGCAGGTGCATTCGATAAAG 628
BSNT_04644___ 671 CCGATGTCGGTAAAGCAACCGCCGAAAGCATGTATAAATCAGGCGTAGAT 720
|.||..||||.||||||||.||.|||||||||||.|||||.|||||.||.
BPUM_2823 629 CAGACATCGGGAAAGCAACAGCTGAAAGCATGTACAAATCTGGCGTTGAC 678
BSNT_04644___ 721 GTTATTTATCACTCTGCGGGCGCCACTGGCACAGGCGTCTTTACTGAAGC 770
.|.||.|||||..|.||.||||.||||||.||.||.|||||.||.|||||
BPUM_2823 679 ATCATCTATCATGCAGCTGGCGGCACTGGAACTGGTGTCTTCACAGAAGC 728
BSNT_04644___ 771 GAAAAACCTGAAAAAAGAAGATCCAAAACGCGATGTCTGGGTCATCGGTG 820
|||||||||||||||||..|||||.||.||..|.||.|||||||||||||
BPUM_2823 729 GAAAAACCTGAAAAAAGCGGATCCTAACCGTAAAGTTTGGGTCATCGGTG 778
BSNT_04644___ 821 TCGATAAAGACCAATACGCAGAAGGCCAGGTAGAAGGAACAGATGATAAC 870
|.|||||||||||.||.|..|||||..|.|||...||||||.|..|.|..
BPUM_2823 779 TAGATAAAGACCAGTATGACGAAGGAAAAGTACCTGGAACAAAACAAAGT 828
BSNT_04644___ 871 GTCACCCTCACTTCCATGGTGAAAAAAGTAGATACAGTCGTTGAAGATGT 920
|||||.||.|||||.||||||||.|||||.||.||||..||..||||..|
BPUM_2823 829 GTCACGCTTACTTCTATGGTGAAGAAAGTCGACACAGCGGTACAAGACTT 878
BSNT_04644___ 921 AACGAAAAAAGCGAGTGACGGAAAGTTCCCGGGCGGCGAAACACTTACCT 970
|||.|..|||||.|..||.||.||||||||.|||||||||....|.||.|
BPUM_2823 879 AACAACGAAAGCAAAAGATGGTAAGTTCCCTGGCGGCGAAGTGATCACAT 928
BSNT_04644___ 971 ACGGGCTTGATCAAGACGGAG---TCGGCATTTCTCCATCTAAACAAAAT 1017
||||.| ||| ||||.||.| |.|.|||||||||||||.|..||||.
BPUM_2823 929 ACGGTC-TGA--AAGAAGGCGCTCTTGACATTTCTCCATCTCAGGAAAAC 975
BSNT_04644___ 1018 CTATCG-GATGATGTGATCAAAG-CGGTCGATAAATGGAAGAAAAAAATC 1065
|| |.| .|.||||| ||.|||| ..||.||..|||||||..||||||||
BPUM_2823 976 CT-TAGTAAAGATGT-ATTAAAGAAAGTGGAAGAATGGAAACAAAAAATC 1023
BSNT_04644___ 1066 ATCGACGG----ATTGGAAATCCCGGCAAC---TGA-GAAAGAGCTGAAA 1107
|||.|.|| ||| .|||||||.||||| ||| ||| ||.|||
BPUM_2823 1024 ATCAAGGGTGAAATT-AAAATCCCTGCAACACGTGATGAA----CTAAAA 1068
BSNT_04644___ 1108 ACCTTCAAAGCTGAATAA 1125
...||.||||||.||
BPUM_2823 1069 GATTTTAAAGCTTAA--- 1083
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