Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04667 and BPUM_2841

See Amino acid alignment / Visit BSNT_04667 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence dna-align/BSNT_04667___degQ.1.24716.seq
#    -bsequence dna-align/BPUM_2841___degQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04667___degQ-BPUM_2841___degQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04667___degQ-BPUM_2841___degQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04667___degQ
# 2: BPUM_2841___degQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:     106/145 (73.1%)
# Similarity:   106/145 (73.1%)
# Gaps:           8/145 ( 5.5%)
# Score: 373.5
# 
#
#=======================================

BSNT_04667___      1 ATGGAAAA----GAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCG     46
                     ||||||||    |||| |.||||||.|.||||||||.||||....|||.|
BPUM_2841___d      1 ATGGAAAAGTATGAAA-TCGAAGAACTTAAACAATTATTATGGAAACTTG     49

BSNT_04667___     47 AACTTGATATTAAAGAAACGACAGATTCATTACGAAACATTAACAAAAGC     96
                     ||...||.||||.||||||.||.|.|||..|.|..|||||||||||||||
BPUM_2841___d     50 AAAACGAAATTAGAGAAACAACGGCTTCTCTTCATAACATTAACAAAAGC     99

BSNT_04667___     97 ATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA    141
                     ||||||||...|||.|||||..|.||||   ||||||||||.|.|
BPUM_2841___d    100 ATTGATCAGTACGACAAATATGAATATG---TGAAAATTTCTTAA    141


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