Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04677 and BPUM_2849

See Amino acid alignment / Visit BSNT_04677 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence dna-align/BSNT_04677___yueG.1.24716.seq
#    -bsequence dna-align/BPUM_2849___yueG2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04677___yueG-BPUM_2849___yueG2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04677___yueG-BPUM_2849___yueG2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04677___yueG
# 2: BPUM_2849___yueG2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     145/250 (58.0%)
# Similarity:   145/250 (58.0%)
# Gaps:          56/250 (22.4%)
# Score: 349.0
# 
#
#=======================================

BSNT_04677___      1 ATGCCTGCAATTGTGGGGCCGATTTATATCATGTCAGTTACG-GGTAATG     49
                     |||||||||||.||.||.||.|||.|||||..|||| |||.| ||.||||
BPUM_2849___y      1 ATGCCTGCAATCGTTGGACCTATTCATATCGAGTCA-TTAGGAGGCAATG     49

BSNT_04677___     50 CCGCGGCAAGCTTT-GGAGACATATTTGCGATTTCGCCCAAAAGC-GTCG     97
                     ..||.||.| |||| ||.||..||.|.||.|||.| ||||..||| ||.|
BPUM_2849___y     50 GTGCAGCTA-CTTTCGGTGATGTACTGGCCATTGC-CCCATTAGCTGTAG     97

BSNT_04677___     98 CTCATTC-AGGGGCGGGGTCAGGCGCATTTCAGCTT--GGTGATTTTGTG    144
                     ..||.|| |..||||||| ||||.||.|||.|  ||  |||||||.|.||
BPUM_2849___y     98 ACCACTCGACTGGCGGGG-CAGGAGCCTTTAA--TTCAGGTGATTATATG    144

BSNT_04677___    145 AAGATTAACAA-----CCAAACGAGTAAAACTCTCTTCGAAGATGC----    185
                     ....|| ||||     ||.||              |.|||.|||||    
BPUM_2849___y    145 TCTCTT-ACAAGTGATCCGAA--------------TGCGACGATGCTTTG    179

BSNT_04677___    186 CGATATCACTGATGAAACAGTT-------------TCGTTTAACGGGTAA    222
                     .|||.||||       |..|||             ||.|||||.|..||.
BPUM_2849___y    180 GGATTTCAC-------ATTGTTTGGCCAGCCTCAATCATTTAATGCATAG    222


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