Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04764 and BPUM_2879
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence dna-align/BSNT_04764___yuzB.1.24716.seq
# -bsequence dna-align/BPUM_2879.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04764___yuzB-BPUM_2879.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04764___yuzB-BPUM_2879.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04764___yuzB
# 2: BPUM_2879
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 168/240 (70.0%)
# Similarity: 168/240 (70.0%)
# Gaps: 6/240 ( 2.5%)
# Score: 554.0
#
#
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BSNT_04764___ 1 ATGAATCCAATGATTGAATTTTGTGTCAGCAATCTGGCTCACGGCTCTCA 50
.||...|||.||||.|||||||||||.||.|||||.||.||.||.|||||
BPUM_2879 1 GTGTTCCCACTGATCGAATTTTGTGTAAGTAATCTTGCGCAAGGGTCTCA 50
BSNT_04764___ 51 GGAAGCCCGGGCGATTTTGGAGAAGGATCCCAACCTTGATGTCCTTGAAT 100
.|||||....|.||...|.||.||.||.||.|||||.||.||..|.||||
BPUM_2879 51 AGAAGCAAAAGAGAAGCTTGATAAAGACCCAAACCTAGACGTTATGGAAT 100
BSNT_04764___ 101 ATGGCTGCTTAAGCTACTGCGGGACATGCATGGAATCGCTTTTCGCTCTG 150
|.|||||.||||||||||||||.|.|||.|||||.||.|..||.||.||.
BPUM_2879 101 ACGGCTGTTTAAGCTACTGCGGCAAATGTATGGACTCCCCATTTGCACTC 150
BSNT_04764___ 151 GTAAACGGAGAAGTCGTCATGGGTGAAACGCCTGCTG---AGCTTGTTGA 197
||.||.||||||.|.||....||.|||| .|||.| ||||.||.||
BPUM_2879 151 GTGAATGGAGAATTTGTTTCCGGAGAAA---ATGCAGAGCAGCTAGTCGA 197
BSNT_04764___ 198 GAATATATATACCTTTATTGAAGAAAATCCAATGTTTTAA 237
|..|||.|||.|.|||||.||.||||||...|||||||||
BPUM_2879 198 GCGTATTTATGCTTTTATAGAGGAAAATGAGATGTTTTAA 237
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