Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04862 and BPUM_2938

See Amino acid alignment / Visit BSNT_04862 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:36
# Commandline: needle
#    -asequence dna-align/BSNT_04862___gcvH.1.24716.seq
#    -bsequence dna-align/BPUM_2938___gcvH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04862___gcvH-BPUM_2938___gcvH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04862___gcvH-BPUM_2938___gcvH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04862___gcvH
# 2: BPUM_2938___gcvH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:     319/384 (83.1%)
# Similarity:   319/384 (83.1%)
# Gaps:           0/384 ( 0.0%)
# Score: 1335.0
# 
#
#=======================================

BSNT_04862___      1 TTGAGCATACCAAAAGATTTGCGTTACTCAGGAGAACACGAGTGGGTAAA     50
                     .||||||.||||||||||||.|||||.||||.||||||.||.|||||.||
BPUM_2938___g      1 ATGAGCACACCAAAAGATTTACGTTATTCAGAAGAACATGAATGGGTCAA     50

BSNT_04862___     51 AGTTGAAGGAGAAAAAGCCAGAATCGGAATTACGCATTTTGCCCAGTCCG    100
                     |||.|||||||||||.|...|.|||||.||||||||||||||.||.||.|
BPUM_2938___g     51 AGTAGAAGGAGAAAAGGTGCGTATCGGTATTACGCATTTTGCTCAATCTG    100

BSNT_04862___    101 AACTAGGCGACATCGTGTTTGTCGAACTTCCTGAAGTGGGCGCTGAAATC    150
                     |.||||||||.||||||||.||.||.|||||||||||.||.|...||||.
BPUM_2938___g    101 AGCTAGGCGATATCGTGTTCGTTGAGCTTCCTGAAGTAGGAGACAAAATT    150

BSNT_04862___    151 AAAGCGGACGAGCCATTCGGCAGTGTTGAATCCGTTAAAACGGTATCTGA    200
                     |.||||||||||||.|||||.|||||.|||||.||.|||||.||.|||||
BPUM_2938___g    151 ACAGCGGACGAGCCTTTCGGAAGTGTAGAATCAGTGAAAACAGTTTCTGA    200

BSNT_04862___    201 GCTTTATGCACCGATTAACGGAACGGTTGTGGAAGTAAACGAAGATCTTG    250
                     ||||||.||||||||.|||||.||..||||.|||||.|||||.||.||.|
BPUM_2938___g    201 GCTTTACGCACCGATCAACGGTACAATTGTTGAAGTGAACGATGAGCTGG    250

BSNT_04862___    251 ATGACAGTCCGGAATTCGTCAACGAATCTCCGTACGAAAAAGCATGGATG    300
                     |||||||.||.||||||||||||||.|||||.||||||||||||||||||
BPUM_2938___g    251 ATGACAGCCCTGAATTCGTCAACGACTCTCCATACGAAAAAGCATGGATG    300

BSNT_04862___    301 ATCGTCGTTGAGCCATCTGACGCTTCTGAAATTGAAAAACTGATGACAGC    350
                     |||||.||.||||||.||||..|.|||||||||||.||..|||||||.||
BPUM_2938___g    301 ATCGTGGTAGAGCCAGCTGATACATCTGAAATTGAGAACTTGATGACTGC    350

BSNT_04862___    351 AGAGCAATACGAAGAGATGACACAAGAAGACTAA    384
                     .||||||||.|||||.||||||.|||||||||||
BPUM_2938___g    351 TGAGCAATATGAAGAAATGACAAAAGAAGACTAA    384


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