Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04863 and BPUM_2939
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_04863___yusI.1.24716.seq
# -bsequence dna-align/BPUM_2939___arsC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04863___yusI-BPUM_2939___arsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04863___yusI-BPUM_2939___arsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04863___yusI
# 2: BPUM_2939___arsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity: 260/371 (70.1%)
# Similarity: 260/371 (70.1%)
# Gaps: 25/371 ( 6.7%)
# Score: 861.5
#
#
#=======================================
BSNT_04863___ 1 ---ATGTCGTTAACTTTTTACTG-GTACCCTAAATGCGGAACGTGCCGCA 46
.||.|.|||..|||||| || .|||||....|||||.||.|||||.|
BPUM_2939___a 1 ATGGTGGCTTTAGATTTTTA-TGAATACCCATCTTGCGGTACATGCCGAA 49
BSNT_04863___ 47 AAGCAAAGAAGTGGCTTGAAGAGCATGGGAAAGAAATAAACGAAATACAT 96
|||||||.||.|||||.|||||.||....|||||.||.|||...||||||
BPUM_2939___a 50 AAGCAAAAAAATGGCTGGAAGAACACAATAAAGACATCAACAGCATACAT 99
BSNT_04863___ 97 ATTGCTGAGCAGCCGCCAAGCAAAGAAGAATTAAAAGCGCTTTATGAAAA 146
||.|..||..||.||||.|..||||||..|||||||||.|||||.|||||
BPUM_2939___a 100 ATCGTCGAAGAGACGCCTAATAAAGAAACATTAAAAGCCCTTTACGAAAA 149
BSNT_04863___ 147 AAGCGGGCTGGATCTCAAGAAATTTTTCAACACGAGCGG-CATGAAATAC 195
||||||..|.||..|.|||||.||.||.||.||.||.|| || |||||||
BPUM_2939___a 150 AAGCGGCTTAGAGTTGAAGAAGTTCTTTAATACAAGTGGACA-GAAATAC 198
BSNT_04863___ 196 CGCGAGCTCAATCTCAAGGAAAAGCTGTAT-CACATGTCAGAGGACGAAC 244
||.|||||..|.||.||.||..|.||...| || ||||||||||||||.|
BPUM_2939___a 199 CGAGAGCTACAGCTGAAAGATCAACTTCCTGCA-ATGTCAGAGGACGAGC 247
BSNT_04863___ 245 AGCTCGAGCTGCTGGCTTCAGATGGTATGCTGATCAAACGCCCGCTTACA 294
||||.||..|.||.||.||..||||.|||||||||||.||.|||.|||||
BPUM_2939___a 248 AGCTAGAATTACTCGCATCTAATGGAATGCTGATCAAGCGTCCGATTACA 297
BSNT_04863___ 295 ACAGACGGTGAAAAAGTGACTGTCGGATTTAAAGAAGACCAATTTGAAGA 344
|||||||||.||..|||.||.||.||||||||.|||||...|||| |
BPUM_2939___a 298 ACAGACGGTAAACGAGTCACAGTTGGATTTAATGAAGATACATTT----A 343
BSNT_04863___ 345 AAA----CTGGGCTTAA---- 357
||| |||| ||
BPUM_2939___a 344 AAAGCGTCTGG----AAATGA 360
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