Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04884 and BPUM_2948
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_04884.1.24716.seq
# -bsequence dna-align/BPUM_2948.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04884-BPUM_2948.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04884-BPUM_2948.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04884
# 2: BPUM_2948
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity: 171/255 (67.1%)
# Similarity: 171/255 (67.1%)
# Gaps: 9/255 ( 3.5%)
# Score: 544.5
#
#
#=======================================
BSNT_04884 1 ATGGAACAAAAACTTCAGGAGCAGCTTGATGGATTGCTAGAGAAGTATAC 50
||||.|.|..||||..|..|..||||.||.||.|||||.|||||.|||||
BPUM_2948 1 ATGGGAAATGAACTAGATCAAAAGCTGGAAGGCTTGCTTGAGAAATATAC 50
BSNT_04884 51 TGAGCTTCTGCTTGGTGAAACAAACGATGAGCTAAAAGAAGAAGTGAAGC 100
||||||.|||||.||.|||.|||..||.|..||.|||.||||.|||||.|
BPUM_2948 51 TGAGCTGCTGCTCGGCGAATCAACAGACGCACTGAAACAAGAGGTGAAAC 100
BSNT_04884 101 AATGGATTTTGTACACGCATATAGCCAAGAGCATGCCTCCGCTCGCTAAG 150
|.|||||..|.||..|.|||||.|||||.||.|||||.||.||.||.|||
BPUM_2948 101 AGTGGATCATCTATTCTCATATTGCCAAAAGTATGCCGCCTCTAGCAAAG 150
BSNT_04884 151 CATTGGAATGCGACATACCCCGACGCAAAGCAGGGCATTAAAGAGATCAT 200
||||..||||..|||||.||.||.|||||..|.|..||.|||.|.|..||
BPUM_2948 151 CATTTCAATGAAACATATCCAGAAGCAAAAGAAGAAATCAAACACACGAT 200
BSNT_04884 201 TCAGCATATTAAGGAATTAAATGAAGCGCATCGAAACAAACAA--TAG-- 246
|||.|..||.||..|.||.||.|||||.|||||...|||..|| ||.
BPUM_2948 201 TCAACGAATCAAACAGTTGAACGAAGCTCATCGCGCCAATAAAGGTAAAT 250
BSNT_04884 246 ----- 246
BPUM_2948 251 TTTAA 255
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