Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04920 and BPUM_2958

See Amino acid alignment / Visit BSNT_04920 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence dna-align/BSNT_04920.1.24716.seq
#    -bsequence dna-align/BPUM_2958.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04920-BPUM_2958.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04920-BPUM_2958.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04920
# 2: BPUM_2958
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity:     128/195 (65.6%)
# Similarity:   128/195 (65.6%)
# Gaps:          36/195 (18.5%)
# Score: 476.0
# 
#
#=======================================

BSNT_04920         1 GTGGCACAGGTAAGGCTAGCTGGAAATCAAGAAGAAATTGA---------     41
                     .|||||||..|..|..||||.||||...||||.||.|||||         
BPUM_2958          1 ATGGCACAAATTCGTTTAGCAGGAACAAAAGAGGAGATTGACCGTATTCT     50

BSNT_04920        42 ACAGCTCATTAGATCATTTGAAAAGCATTATGATGTCTCTTATACATCAA     91
                     ||||         ||.|||||.|||||||||||.||..|.||||||||||
BPUM_2958         51 ACAG---------TCGTTTGACAAGCATTATGAAGTGACATATACATCAA     91

BSNT_04920        92 AGGAGTACGGAAGGACGAATCCAAAATACAAATATTCAAAGGATTCCCGC    141
                     |.||.|||||||..|||||.|||||||||||||||||.||.|||..||||
BPUM_2958         92 AAGATTACGGAAAAACGAACCCAAAATACAAATATTCGAAAGATGTCCGC    141

BSNT_04920       142 GTATATCTTGAATTAAAATTAAAATCTGCCAAGATCGAAAAATAA    186
                     ||.|||.|||||.||||||||||||     ||             
BPUM_2958        142 GTTTATATTGAACTAAAATTAAAAT-----AA-------------    168


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