Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05351 and BPUM_3150

See Amino acid alignment / Visit BSNT_05351 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence dna-align/BSNT_05351___csbA.1.24716.seq
#    -bsequence dna-align/BPUM_3150.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05351___csbA-BPUM_3150.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05351___csbA-BPUM_3150.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05351___csbA
# 2: BPUM_3150
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     179/247 (72.5%)
# Similarity:   179/247 (72.5%)
# Gaps:          17/247 ( 6.9%)
# Score: 649.0
# 
#
#=======================================

BSNT_05351___      1 TTGATTACAAAAGCCGTTTTTGCA-TTGTTTTTCCCTTTTATGCTTGTTG     49
                     .||||||||||||||.|.|||||| |||||||| |||||..||||||||.
BPUM_3150          1 GTGATTACAAAAGCCATATTTGCACTTGTTTTT-CCTTTCCTGCTTGTTA     49

BSNT_05351___     50 TTCTATTTACTAGAGTCACCTTTAATCATTATGTGGCGATCGCTTTAACA     99
                     ||.|||||.|.|..||.||.|.||||||||||||||..||.||.||||||
BPUM_3150         50 TTTTATTTTCAAAGGTGACTTATAATCATTATGTGGGCATTGCATTAACA     99

BSNT_05351___    100 GCTGCATTGCTGTTTGCCTCTTATTTAAAAGGCTATACAGAAACGTATTT    149
                     ||.||..|..|.||||||||.|||.|.||.||||||||||||||.||.||
BPUM_3150        100 GCAGCGCTTTTATTTGCCTCGTATATGAAGGGCTATACAGAAACCTACTT    149

BSNT_05351___    150 TATTGTAGGATTGGATGTTGTGTCTCTTGTGGCTGGCGGACTGTACATGG    199
                     ||||||||||||.|||.|..|.|||.|.||.|||||.|.|.|.||.||||
BPUM_3150        150 TATTGTAGGATTAGATATCATTTCTTTAGTAGCTGGTGCATTATATATGG    199

BSNT_05351___    200 CCAAAAAAG---CTGCAGAGA---AAAAAGAAGAATAA---------    231
                     |.|||||||   .||.|.|||   ||||.|..|||.||         
BPUM_3150        200 CTAAAAAAGAAATTGAAAAGAGAGAAAAGGCTGAAAAACATCATTGA    246


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