Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05364 and BPUM_3169

See Amino acid alignment / Visit BSNT_05364 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_05364___ftsX.1.24716.seq
#    -bsequence dna-align/BPUM_3169___ftsX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05364___ftsX-BPUM_3169___ftsX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05364___ftsX-BPUM_3169___ftsX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05364___ftsX
# 2: BPUM_3169___ftsX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity:     615/912 (67.4%)
# Similarity:   615/912 (67.4%)
# Gaps:         105/912 (11.5%)
# Score: 2143.5
# 
#
#=======================================

BSNT_05364___      0 --------------------------------------------------      0
                                                                       
BPUM_3169___f      1 ATGATTAAAACTCTCTCGCGGCATTTACGTGAGAGCTTCCGTTCACTTGG     50

BSNT_05364___      1 -------------ATGACATTTGCATCCATTAGTGCTGTAACCGTTACGC     37
                                  ||||||||||||||.||||||||.||.||.||.||..
BPUM_3169___f     51 AAGAAACACGTGGATGACATTTGCATCAATTAGTGCGGTCACTGTCACAT    100

BSNT_05364___     38 TGATTTTAGTCGGCGTGTTTTTAGTGATTATGCTGAATTTGAATAACATG     87
                     ||||||||||.||.||.|||.|.||.||||||||.||.||||||||||||
BPUM_3169___f    101 TGATTTTAGTTGGGGTTTTTCTTGTCATTATGCTCAACTTGAATAACATG    150

BSNT_05364___     88 GCCACGAATGCTGAAAAACAAGTCGAAATCAAAGTGCTGATTGATCTGAC    137
                     ||..||||.|||||.|||.||||.|||.|.|||||.|||||.|||.|.||
BPUM_3169___f    151 GCATCGAACGCTGAGAAAGAAGTAGAAGTAAAAGTTCTGATCGATTTAAC    200

BSNT_05364___    138 TGCAGATCAGAAGGCA-CAGG-------ACAAGCTTCAGAACGATATTAA    179
                     .||..|||| ||.||| ||||       |.|||   |||||    |||.|
BPUM_3169___f    201 CGCGAATCA-AAAGCAGCAGGATGAATTAAAAG---CAGAA----ATTGA    242

BSNT_05364___    180 GGAA-----CTGAAGGGCATTCAGAG-TGTCACTTTTTCATCTAAAGAAA    223
                      |||     ||||     |.||||.| |||.|..|..|||||.||.||..
BPUM_3169___f    243 -GAAGATTCCTGA-----AATCAGTGATGTGAAATACTCATCCAAGGATG    286

BSNT_05364___    224 AAGAGCTTGACCAG--CTGGTTGACAGTTTTGGTGACAGCGGAAAATCCC    271
                     |.|||||..|  ||  |||.||.|.||.||||||||.|..|||.|||||.
BPUM_3169___f    287 ATGAGCTCAA--AGCACTGATTAAAAGCTTTGGTGAAAATGGACAATCCA    334

BSNT_05364___    272 TGACAATGAAGGATCAGGAAAACCCGCTTAATGATGCGTTTGTCGTCAAA    321
                     ||..|.|....|||||.||||||||..|.||.|||||||||.|.||.|||
BPUM_3169___f    335 TGGGACTTGTTGATCAAGAAAACCCATTAAACGATGCGTTTATTGTGAAA    384

BSNT_05364___    322 ACGACAGATCCGCATGATACGCCGAACGTGGCGAAAAAGATCGAAA----    367
                     ||..|||||||.||.|||||.||.||.||.||.|||||..|.||||    
BPUM_3169___f    385 ACATCAGATCCACACGATACACCAAAAGTTGCTAAAAAATTAGAAAACCT    434

BSNT_05364___    368 AAATGGATCATGTTTATAAAGTCACTTATGGAAAAGAAGAGGTCAGCCGT    417
                     |||.||    |...||||||||.||.||.||.||||||||.||||||||.
BPUM_3169___f    435 AAAAGG----TACGTATAAAGTAACCTACGGTAAAGAAGAAGTCAGCCGA    480

BSNT_05364___    418 TTGTTTAAAGTGGTCGGCGTTTCCCGCAACATCGGAATCGCGTTAATTAT    467
                     .|.|||||.||||||||.||..|.||.||..|.||.||.|||.|.||.||
BPUM_3169___f    481 CTCTTTAATGTGGTCGGAGTGGCGCGAAATGTAGGGATTGCGCTCATCAT    530

BSNT_05364___    468 CGGCCTGGTATTTACGGCGATGTTCTTAATTTCCAACACCATTAAAATTA    517
                     .||.||..|||||||.||.||||||||.||.||.||.||.||.|||||||
BPUM_3169___f    531 TGGGCTTTTATTTACAGCCATGTTCTTGATCTCAAATACGATCAAAATTA    580

BSNT_05364___    518 CAATTTTCGCAAGAAGAAAAGAAATTGAAATCATGAAGCTTGTCGGTGCG    567
                     |.|||||.||.|||.|.||||||||.||.||.|||||||||||.|||||.
BPUM_3169___f    581 CGATTTTTGCTAGACGTAAAGAAATCGAGATTATGAAGCTTGTAGGTGCA    630

BSNT_05364___    568 ACAAACTGGTTTATCCGCTGGCCGTTTTTCCTTGAAGGATTGCTGCTAGG    617
                     ||.|||||||||||||||||||||||.||..||||||||||.|||||.||
BPUM_3169___f    631 ACGAACTGGTTTATCCGCTGGCCGTTCTTTATTGAAGGATTACTGCTTGG    680

BSNT_05364___    618 CGTATTCGGTTCTGTGATTCCGATTGCACTGGTGCTGAGCACTTACCAAT    667
                     .|||||.|||||..|.||.|||||||||||..||||..||||.||.||||
BPUM_3169___f    681 TGTATTTGGTTCCATTATACCGATTGCACTTCTGCTTGGCACATATCAAT    730

BSNT_05364___    668 ACGTCA-TCGGATGGGTCGTTCCAAAGGTTCAAGGATCATTTGTCTCTCT    716
                     |.| || |.||.|||||.|..||.|..||.|||||.||||||.|.||..|
BPUM_3169___f    731 ATG-CAGTGGGCTGGGTGGCACCGAGAGTACAAGGCTCATTTATTTCCAT    779

BSNT_05364___    717 TCTTCCTTATAATCCATTTGTATTCCAAGTTTCGCTAGTGCTGATTGCAA    766
                     .|||||.|||||.||.|||||.|..|||||.||.||.||.||..||...|
BPUM_3169___f    780 GCTTCCATATAACCCGTTTGTTTATCAAGTGTCACTGGTCCTTCTTTTGA    829

BSNT_05364___    767 TCGGCGCAGTAATTGGAGTATGGGGAAGTCTGACTTCCATCCGCAAGTTT    816
                     ||||.|||.|.|||||.||||||||||||.||||.||||||||.||.||.
BPUM_3169___f    830 TCGGTGCAATCATTGGTGTATGGGGAAGTTTGACGTCCATCCGTAAATTC    879

BSNT_05364___    817 TTGCGAGTATAA    828
                     ||...|||||||
BPUM_3169___f    880 TTAAAAGTATAA    891


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05364 and BPUM_3169

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
