Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05365 and BPUM_3170

See Amino acid alignment / Visit BSNT_05365 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_05365___ftsE.1.24716.seq
#    -bsequence dna-align/BPUM_3170___ftsE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05365___ftsE-BPUM_3170___ftsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05365___ftsE-BPUM_3170___ftsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05365___ftsE
# 2: BPUM_3170___ftsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 691
# Identity:     549/691 (79.5%)
# Similarity:   549/691 (79.5%)
# Gaps:           8/691 ( 1.2%)
# Score: 2148.0
# 
#
#=======================================

BSNT_05365___      1 ATGATAGAGATGAAGGAAGTATATAAAGCCTATCCGAACGGCGTAAAAGC     50
                     |||||.||.|||||||||||.||.||...||||||.|||||.|||||.||
BPUM_3170___f      1 ATGATTGAAATGAAGGAAGTCTACAAGATCTATCCTAACGGTGTAAAGGC     50

BSNT_05365___     51 GCTCAATGGGATTTCTGTTACCATTCATCCCGGTGAGTTTGTGTATGTTG    100
                     |.|||||||.||...|||..|.|||||.||.||.|||||||||||.||||
BPUM_3170___f     51 GATCAATGGAATCAATGTCTCTATTCACCCAGGAGAGTTTGTGTACGTTG    100

BSNT_05365___    101 TTGGTCCGAGCGGAGCGGGTAAATCTACTTTTATAAAAATGATTTACAGA    150
                     |||||||.||.||.||.||||||||.||.||.||.||||||||.||..|.
BPUM_3170___f    101 TTGGTCCCAGTGGTGCTGGTAAATCCACATTCATCAAAATGATGTATCGT    150

BSNT_05365___    151 GAAGAAAAACCGA-CAAAAGGACAAATTTTAATCAATCATAAAGATCTCG    199
                     |||||.||.||.| ||||.||| ||||.|||||.|||.|.||||||.|.|
BPUM_3170___f    151 GAAGAGAAGCCAAGCAAAGGGA-AAATCTTAATTAATAACAAAGATTTAG    199

BSNT_05365___    200 CGACAATTAAAGAAAAAGAGATTCCTTTCGTGCGCCGCAAAATAGGCGTT    249
                     ...|||||||.||||||||.||.||||.|.|..|..|..||||.|||||.
BPUM_3170___f    200 GCTCAATTAAGGAAAAAGAAATACCTTACTTAAGAAGAGAAATTGGCGTA    249

BSNT_05365___    250 GTCTTTCAGGATTTCAAGCTTCTTCCGAAACTAACTGTTTTTGAAAATGT    299
                     ||.||.||.||||||||.||.|||||.|..||.||.||.|||||.||.||
BPUM_3170___f    250 GTGTTCCAAGATTTCAAACTACTTCCAACTCTCACAGTGTTTGAGAACGT    299

BSNT_05365___    300 GGCATTTGCCCTTGAAGTGATTGGAGAACAGCCGTC-TGTCATTAAGAAA    348
                     |||||||||.||||||||.|||||.|||||||| || ..|||||||||||
BPUM_3170___f    300 GGCATTTGCTCTTGAAGTCATTGGGGAACAGCC-TCAAATCATTAAGAAA    348

BSNT_05365___    349 CGGGTGCTTGAAGTGCTTGATCTCGTGCAGCTGAAGCATAAAGCGCGACA    398
                     ..||||||.||.||.||||||.|.||.||.||.|||||.|||||.|||||
BPUM_3170___f    349 AAGGTGCTGGATGTACTTGATTTGGTACAACTCAAGCACAAAGCACGACA    398

BSNT_05365___    399 ATTTCCTGACCAGCTTTCAGGCGGGGAGCAGCAGCGTGTATCTATTGCCA    448
                     |||||||||||||||.||.|||||.|||||||||||||||||.||.||..
BPUM_3170___f    399 ATTTCCTGACCAGCTCTCTGGCGGTGAGCAGCAGCGTGTATCGATCGCTC    448

BSNT_05365___    449 GATCAATTGTGAACAACCCTGATGTTGTCATTGCTGATGAACCGACAGGA    498
                     |.||.||.|||||.|..|||||.||.||||||||.||.||.|||||||||
BPUM_3170___f    449 GCTCGATCGTGAATAGTCCTGAGGTAGTCATTGCGGACGAGCCGACAGGA    498

BSNT_05365___    499 AACCTTGATCCGGATACGTCCTGGGAAGTCATGAAGACGCTGGAGGAAGT    548
                     |||||||||||.||.||.||.||||||.||||||||||.||.||.||..|
BPUM_3170___f    499 AACCTTGATCCAGACACATCTTGGGAAATCATGAAGACACTCGAAGAGAT    548

BSNT_05365___    549 TAATAACCGCGGGACAACAGTCGTGATGGCGACACATAATAAAGAAATCG    598
                     |||||||||.||.|||||||||||.|||||.||||||||.|||||.||.|
BPUM_3170___f    549 TAATAACCGAGGAACAACAGTCGTCATGGCAACACATAACAAAGAGATTG    598

BSNT_05365___    599 TAAACACCATGAAGAAACGTGTCATTGCAATCGAAGATGGTATCATTGTG    648
                     ||||||.||||||||||||.|||||.||||||||||||||.||.||||||
BPUM_3170___f    599 TAAACAGCATGAAGAAACGCGTCATCGCAATCGAAGATGGAATGATTGTG    648

BSNT_05365___    649 CGTGATGAGTCAAGAGGGGAGTATGGTTCA--TATGATTAA    687
                     |||||.||..|||||||||||||.||  ||  |||||||||
BPUM_3170___f    649 CGTGACGAAGCAAGAGGGGAGTACGG--CATTTATGATTAA    687


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