Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05629 and BPUM_3331
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_05629___atpE.1.24716.seq
# -bsequence dna-align/BPUM_3331___atpE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05629___atpE-BPUM_3331___atpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05629___atpE-BPUM_3331___atpE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05629___atpE
# 2: BPUM_3331___atpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 179/215 (83.3%)
# Similarity: 179/215 (83.3%)
# Gaps: 4/215 ( 1.9%)
# Score: 746.0
#
#
#=======================================
BSNT_05629___ 1 ATGAATTTAATAGCAGCTGCGATTGCAATTGGTTTAGGCGCACTTGGTGC 50
|||||||||||||||||.||.||||||||.|||||.||.|||||.||.||
BPUM_3331___a 1 ATGAATTTAATAGCAGCAGCAATTGCAATCGGTTTGGGAGCACTAGGAGC 50
BSNT_05629___ 51 AGGTATTGGTAACGGTTTGATTGTTTCACGTACGGTAGAGGGGATTGCCC 100
||||||||||||||||.|.||.||.||....||.||.||.||.||.||.|
BPUM_3331___a 51 AGGTATTGGTAACGGTCTAATCGTATCTAAAACAGTTGAAGGAATCGCTC 100
BSNT_05629___ 101 GTCAGCCGGAAGCAGGTAAAGAACTGAGAACTCTTATGTTCAT--GGGTA 148
|||||||.|||||.||||.||||||.||||||||||||||||| |||||
BPUM_3331___a 101 GTCAGCCAGAAGCTGGTAGAGAACTAAGAACTCTTATGTTCATCGGGGTA 150
BSNT_05629___ 149 TCGCATTAGTTGAAGCCCTTCCTATTATCGCTGTCGTTATCGCATTCTTA 198
||.||||||||.||.|||||.||||||||||||||||||||||||||.
BPUM_3331___a 151 --GCTTTAGTTGAGGCACTTCCAATTATCGCTGTCGTTATCGCATTCTTG 198
BSNT_05629___ 199 GCGTTCTTTGGCTAA 213
||.||||||||.|||
BPUM_3331___a 199 GCATTCTTTGGTTAA 213
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