Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05631 and BPUM_3333
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_05631___atpI.1.24716.seq
# -bsequence dna-align/BPUM_3333___atpI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05631___atpI-BPUM_3333___atpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05631___atpI-BPUM_3333___atpI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05631___atpI
# 2: BPUM_3333___atpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 277/404 (68.6%)
# Similarity: 277/404 (68.6%)
# Gaps: 40/404 ( 9.9%)
# Score: 912.5
#
#
#=======================================
BSNT_05631___ 1 ATGGACGATCCCAA---GCTTACATTTAGCAGACAACGCAAATATTTATT 47
|||.|||||||.|| |.|| ||..|||||||..|.|||||..|.||
BPUM_3333___a 1 ATGAACGATCCAAACGCGATT---TTCCGCAGACAGAGTAAATACATGTT 47
BSNT_05631___ 48 GT-TCATTTTGGCAGTGTATGTACTGGGTTA---------TGGTTTAACA 87
.| || |.||||||.|.|.|||..|.||.|| ||||||
BPUM_3333___a 48 CTATC-TATTGGCAATTTTTGTGTTTGGCTATGCCATGCCTGGTTT---- 92
BSNT_05631___ 88 GCGTATAAA--ACCGTTTTTTTAGGCCTTATTCTGGGAACTGTTTTCAGT 135
|||| ||.||||.|| ||..|.|||.|.||.||..||||...|
BPUM_3333___a 93 -----TAAACCACTGTTTCTT--GGTTTGATTATCGGCACAATTTTTGCT 135
BSNT_05631___ 136 TTGTTTAATTTTTTACTGCTCGTCAGAAGAATGAATGCTTTTGACAGAGC 185
||.||||||||.||.||.||..|..|.||||||.|.||||||||..||||
BPUM_3333___a 136 TTCTTTAATTTATTCCTTCTTATACGGAGAATGCACGCTTTTGATCGAGC 185
BSNT_05631___ 186 TGTTGAGAAAGGAAAGTCCATACGATCTCTCGGGAGCGCAGCGCGGTGGT 235
.|||.|.||||||||.|||||.||.||..|.||.||..||||..|||||.
BPUM_3333___a 186 GGTTAAAAAAGGAAAATCCATTCGTTCAATGGGAAGTACAGCCAGGTGGG 235
BSNT_05631___ 236 GCAATGCGATTCTTGCTGTGGCTGTTGC----CTATAAAAATCCCGAAT- 280
.|||.||.|||||.||.||.||..|||| |..|| |||.|||
BPUM_3333___a 236 CCAACGCAATTCTCGCAGTAGCGATTGCTTGGCGTTA-----CCCTAATG 280
BSNT_05631___ 281 ACTTTCATATGGCAAGTACAGTTATTGGATTAATGACAATATACCCTGTC 330
|..|||||.|||||.||...|||||.|||||||||||||||||.||||||
BPUM_3333___a 281 AAGTTCATCTGGCAGGTGTTGTTATAGGATTAATGACAATATATCCTGTC 330
BSNT_05631___ 331 ATTATGATAGATTCCTTTATCCAGCTTAAACGTTCATCAATGGAAGAGAG 380
|||||||||||||||||.||.||.|||||||||||..|.|||||||||||
BPUM_3333___a 331 ATTATGATAGATTCCTTCATTCAACTTAAACGTTCTACTATGGAAGAGAG 380
BSNT_05631___ 381 GTGA 384
||||
BPUM_3333___a 381 GTGA 384
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