Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05661 and BPUM_3350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence dna-align/BSNT_05661___rpmE.1.24716.seq
# -bsequence dna-align/BPUM_3350___rpmE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05661___rpmE-BPUM_3350___rpmE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05661___rpmE-BPUM_3350___rpmE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05661___rpmE
# 2: BPUM_3350___rpmE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 183/201 (91.0%)
# Similarity: 183/201 (91.0%)
# Gaps: 0/201 ( 0.0%)
# Score: 843.0
#
#
#=======================================
BSNT_05661___ 1 ATGAAAGCAGGAATTCATCCTAATTTCAAAAAAGCAACAGTTAAATGCGC 50
||||||.||||||||||||||||.|.|||||||||.|||||.||||||||
BPUM_3350___r 1 ATGAAAACAGGAATTCATCCTAACTACAAAAAAGCTACAGTCAAATGCGC 50
BSNT_05661___ 51 TTGCGGAAATGAATTTGAAACAGGCTCAGTAAAAGAAGAGGTACGCGTTG 100
|||.||||||||.||||||||.||.|||||||||||||||||||||.|.|
BPUM_3350___r 51 TTGTGGAAATGAGTTTGAAACTGGATCAGTAAAAGAAGAGGTACGCATCG 100
BSNT_05661___ 101 AGATTTGCTCTGAATGCCACCCATTCTACACTGGCCGTCAAAAATTCGCT 150
|||||||||||||.|||||.||.|||||.||.||||||||||||||||||
BPUM_3350___r 101 AGATTTGCTCTGAGTGCCATCCTTTCTATACAGGCCGTCAAAAATTCGCT 150
BSNT_05661___ 151 TCTGCTGATGGTCGTGTTGATCGCTTTAACAAAAAATACGGTCTTAAGTA 200
|||||||||||.||||||||.|||||||||||||||||||||||||||||
BPUM_3350___r 151 TCTGCTGATGGACGTGTTGACCGCTTTAACAAAAAATACGGTCTTAAGTA 200
BSNT_05661___ 201 A 201
|
BPUM_3350___r 201 A 201
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