Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05664 and BPUM_3353
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence dna-align/BSNT_05664___glpX.1.24716.seq
# -bsequence dna-align/BPUM_3353___glpX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05664___glpX-BPUM_3353___glpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05664___glpX-BPUM_3353___glpX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05664___glpX
# 2: BPUM_3353___glpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 968
# Identity: 764/968 (78.9%)
# Similarity: 764/968 (78.9%)
# Gaps: 4/968 ( 0.4%)
# Score: 2980.0
#
#
#=======================================
BSNT_05664___ 1 ATGGAAAGAAGTTTATCAATGGAATTGGTACGTGTGACCGAAGCTGCGGC 50
|||||||||||||||||.||||||.|.|||||.|||||.|||||.||.||
BPUM_3353___g 1 ATGGAAAGAAGTTTATCGATGGAACTAGTACGGGTGACAGAAGCAGCTGC 50
BSNT_05664___ 51 ATTGGCATCAGCAAGATGGATGGGCCGGGGAAAAAAAGATGAGGCTGATG 100
|||...|||.||..|.||||||||..|.|||..||||||.||.||.||||
BPUM_3353___g 51 ATTAAAATCTGCTCGTTGGATGGGAAGAGGATTAAAAGACGAAGCAGATG 100
BSNT_05664___ 101 AAGCGGCAACAAGTGCAATGAGAGACGTTTTTGATACAGTGCCGATGAAA 150
|.||.|||||||||||||||.|.||.||.||||||||..|.|||||||||
BPUM_3353___g 101 ATGCTGCAACAAGTGCAATGCGTGATGTATTTGATACCATTCCGATGAAA 150
BSNT_05664___ 151 GGGACCGTTGTAATCGGTGAAGGGGAAATGGACGAAGCGCCGATGCTGTA 200
||.||.||.||.||.||.||.|||||||||||||||||.||.|||||.||
BPUM_3353___g 151 GGAACAGTGGTCATTGGCGAGGGGGAAATGGACGAAGCACCAATGCTTTA 200
BSNT_05664___ 201 TATCGGGGAAAAACTCGGAAACGGGTACGGCCCTCGCGTTGATGTCGCAG 250
|||.||||||||.||.||.|||||.|||||.|||||.||.|||||.||.|
BPUM_3353___g 201 TATTGGGGAAAAGCTTGGGAACGGATACGGACCTCGTGTGGATGTAGCTG 250
BSNT_05664___ 251 TTGACCCTCTTGAAGGCACAAACATCTTAGCAAGCGGCGGCTGGAACGCG 300
||||.|||.|.|||||.|||||.||..|.|||||||||||||||||.||
BPUM_3353___g 251 TTGATCCTTTAGAAGGAACAAATATTGTGGCAAGCGGCGGCTGGAATGC- 299
BSNT_05664___ 301 CTGA-CGGTGATCGCTGTCGCAGACCACGGC-ACTCTGCTGAATGCTCCT 348
||.| |.||.||.||.||.|||||.||.||| ||| ||||||||||.|||
BPUM_3353___g 300 CTTAGCTGTTATTGCGGTGGCAGATCATGGCAACT-TGCTGAATGCACCT 348
BSNT_05664___ 349 GACATGTATATGCAAAAAATCGCAGTCGGTCCGGAAGCGGTGGGCTGCAT 398
||.|||||.|||.|.||.||||||||.|||||.||||||||.||||||||
BPUM_3353___g 349 GATATGTACATGGATAAGATCGCAGTAGGTCCAGAAGCGGTAGGCTGCAT 398
BSNT_05664___ 399 TGACATCGAAGCACCTGTCATTGACAACCTTAAAGCGGTGGCAAAAGCGA 448
.|||||.|||||.||||||||||||||.|||...||.||.||||||||.|
BPUM_3353___g 399 CGACATTGAAGCGCCTGTCATTGACAATCTTCGTGCTGTAGCAAAAGCAA 448
BSNT_05664___ 449 AAAACAAGGACGTTGAGGACGTCGTTGCCACAATTTTAAACCGTGAAAGA 498
|||||||.||..||||.||.||.|||||.||.|||||||||.|.||..||
BPUM_3353___g 449 AAAACAAAGATATTGAAGATGTGGTTGCAACGATTTTAAACAGAGATCGA 498
BSNT_05664___ 499 CACGAAAAAATCATTTCCGAGCTTCGTGAGGCCGGCGCCAGAATCAAATT 548
||.||.|||||||||.|.||.||..|.||.||.||.||.|||||||||.|
BPUM_3353___g 499 CATGAGAAAATCATTGCTGAACTGAGAGAAGCAGGAGCAAGAATCAAACT 548
BSNT_05664___ 549 GATCAATGACGGCGATGTCGCAGGCGCCATCAACACGGCTTTCGACCACA 598
||||.||||.||.||.||.|||||.|||||.||.||.||.||.||.||.|
BPUM_3353___g 549 GATCGATGATGGTGACGTTGCAGGAGCCATTAATACAGCATTTGATCATA 598
BSNT_05664___ 599 CGGGCGTTGATATCCTGTTCGGATCAGGCGGCGCTCCCGAGGGTGTGCTT 648
|.||.||||||||.||.||.||.||||||||.||.||.||.|||||.|||
BPUM_3353___g 599 CAGGTGTTGATATTCTATTTGGTTCAGGCGGAGCGCCAGAAGGTGTCCTT 648
BSNT_05664___ 649 TCCGCTGTTGCGCTAAAAGCACTCGGAGGAGAAATCATTGGTAAACTTCT 698
||.|||||||||.||||.|||||.||.||.||||||...||.||.|||||
BPUM_3353___g 649 TCTGCTGTTGCGTTAAAGGCACTTGGTGGTGAAATCCACGGAAAGCTTCT 698
BSNT_05664___ 699 TCCGCAAAGCGAAGAAGAAATCACTCGCTGTCACAAAATGGGCCTTGATT 748
|||.|||||.|||||||||.|||..||||||.|.||||||||.||.|||.
BPUM_3353___g 699 TCCTCAAAGTGAAGAAGAACTCAGACGCTGTGAGAAAATGGGGCTGGATG 748
BSNT_05664___ 749 TAAGCAAAGTCCTTCGCATGGAAGACCTTGTGAAGGGTGATGACGCGATT 798
|..||||||||.|..|.|||||||||||.|||||.||.||.|||||.|||
BPUM_3353___g 749 TTGGCAAAGTCTTAAGAATGGAAGACCTCGTGAAAGGCGACGACGCCATT 798
BSNT_05664___ 799 TTTGCAGCTACAGGGGTTACTGACGGCGAGCTGTTAAAAGGAGTTCAATT 848
|||||.||.||.||.||.||.|||||.|||||.||||||||.||||||||
BPUM_3353___g 799 TTTGCTGCGACTGGTGTAACAGACGGTGAGCTATTAAAAGGTGTTCAATT 848
BSNT_05664___ 849 CAAAGGCTCTGTCGGTACAACTGAAAGCTTAGTTATCCGCGCAAAATCGG 898
||||||||||||.||.|||||..|.||..|.||.||.||.||.|||||.|
BPUM_3353___g 849 CAAAGGCTCTGTTGGAACAACACATAGTGTTGTGATGCGTGCGAAATCAG 898
BSNT_05664___ 899 GCACTGTTCGTTTCGTTGATGGCAGACACAGCTTGAAAAAGAAACCAAAT 948
|.||.|||||||||||.|||||||||||||||||.||.||.|||||.|||
BPUM_3353___g 899 GTACAGTTCGTTTCGTAGATGGCAGACACAGCTTAAAGAAAAAACCGAAT 948
BSNT_05664___ 949 CTTGTAATCCGTCCATAA 966
|||||.||.|||||.|||
BPUM_3353___g 949 CTTGTCATTCGTCCGTAA 966
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