Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05671 and BPUM_3357
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_05671___fbaA.1.24716.seq
# -bsequence dna-align/BPUM_3357___fbaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05671___fbaA-BPUM_3357___fbaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05671___fbaA-BPUM_3357___fbaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05671___fbaA
# 2: BPUM_3357___fbaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 860
# Identity: 739/860 (85.9%)
# Similarity: 739/860 (85.9%)
# Gaps: 4/860 ( 0.5%)
# Score: 3187.0
#
#
#=======================================
BSNT_05671___ 1 ATGCCTTTAGTTTCTATGACGGAAATGTTGAATACA-GCTAAAGAAAAAG 49
||||||||||||||.|||||.||||||||||| |.| ||.||.|||||||
BPUM_3357___f 1 ATGCCTTTAGTTTCAATGACAGAAATGTTGAA-AGACGCAAAGGAAAAAG 49
BSNT_05671___ 50 GGTACGCTGTAGGACAATTTAACTTAAACAACCTTGAGTTTACTCAAGCG 99
|.||||||||.|||||.|||||||||||.||..|.||.||.||.||||||
BPUM_3357___f 50 GTTACGCTGTTGGACAGTTTAACTTAAATAATTTAGAATTCACGCAAGCG 99
BSNT_05671___ 100 ATTTTACAAGCAGCTGAAGAAGAAAAATCTCCAGTGATCCTTGGTGTTTC 149
|||||||.|||.|||||||||||.|||||||||||.|||.|.||.||.||
BPUM_3357___f 100 ATTTTACTAGCTGCTGAAGAAGAGAAATCTCCAGTTATCTTAGGAGTATC 149
BSNT_05671___ 150 CGAAGGTGCGGGACGCTACATGGGCGGCTTCAAAACAGTCGTTGCTATGG 199
.|||||.||.|||||||||||||||||||||||||||||.||.||.||||
BPUM_3357___f 150 TGAAGGAGCAGGACGCTACATGGGCGGCTTCAAAACAGTTGTCGCAATGG 199
BSNT_05671___ 200 TAAAAGCACTTATGGAAGAGTACAAAGTGACAGTTCCTGTTGCGATTCAC 249
|.|||||..|.||.|||||.||.||.||.||||||||||||||||||||.
BPUM_3357___f 200 TTAAAGCGTTAATCGAAGAATATAATGTAACAGTTCCTGTTGCGATTCAT 249
BSNT_05671___ 250 TTAGACCACGGTTCAAGCTTTGAATCTTGTGCGAAAGCGATTCATGCAGG 299
|||||.||||||||||||||||||||||||||.|||||.||.||||||||
BPUM_3357___f 250 TTAGATCACGGTTCAAGCTTTGAATCTTGTGCAAAAGCAATCCATGCAGG 299
BSNT_05671___ 300 TTTCACATCTGTAATGATCGACGCTTCTCACCATCCATTTGAAGAAAACG 349
.||.||.|||||.||||||||.|||||||||||||||||.||.||.||||
BPUM_3357___f 300 ATTTACTTCTGTCATGATCGATGCTTCTCACCATCCATTCGATGAGAACG 349
BSNT_05671___ 350 TAGCAACAACTGCTAAAGTTGTTGAGCTTGCTCATTTCCACGGAGTATCT 399
|||||||||||||.|||||.|||||||||||.||||||||.||.||||||
BPUM_3357___f 350 TAGCAACAACTGCGAAAGTAGTTGAGCTTGCACATTTCCATGGTGTATCT 399
BSNT_05671___ 400 GTAGAAGCTGAGCTTGGAACAGTAGGCGGACAAGAAGATGACGTTATCGC 449
||||||||||||||||||||.||.||||||||||||||||||||.|||||
BPUM_3357___f 400 GTAGAAGCTGAGCTTGGAACTGTTGGCGGACAAGAAGATGACGTCATCGC 449
BSNT_05671___ 450 TGAAGGCGTAATTTACGCTGATCCTAAAGAGTGCCAAGAGCTTGTTGAGC 499
|||.|||||.|||||.||||||||.||||||||||||||||||||.||.|
BPUM_3357___f 450 TGAGGGCGTTATTTATGCTGATCCAAAAGAGTGCCAAGAGCTTGTAGAAC 499
BSNT_05671___ 500 GCACTGGCATCGACTGCCTTGCACCTGCATTAGGTTCTGTTCACGGCCCT 549
|.||||||||.||||||||||||||||||||||||||.|||||.||.||.
BPUM_3357___f 500 GTACTGGCATTGACTGCCTTGCACCTGCATTAGGTTCAGTTCATGGTCCA 549
BSNT_05671___ 550 TACAAAGGTGAGCCAAACCTTGGCTTCAAAGAAATGGAAGAGATCGG-AA 598
|||||||||||.|||||||||||.||||..|||||||||||.||.|| ||
BPUM_3357___f 550 TACAAAGGTGAACCAAACCTTGGTTTCACTGAAATGGAAGAAATTGGTAA 599
BSNT_05671___ 599 AATCAACTGGTCTTCCGCTAGTTCTTCACGGCGGTACTGGAATTCCGACT 648
||| .||.||||||||.||.||||||||.|||||.||.||.||.||.|||
BPUM_3357___f 600 AAT-GACAGGTCTTCCACTTGTTCTTCATGGCGGAACAGGTATCCCAACT 648
BSNT_05671___ 649 GCTGACATCAAAAAATCAATTTCACTTGGTACAGCTAAAATCAACGTGAA 698
|||||||||||....||||||||||||||||||||.||||||||.||.||
BPUM_3357___f 649 GCTGACATCAAGCGCTCAATTTCACTTGGTACAGCAAAAATCAATGTAAA 698
BSNT_05671___ 699 TACTGAAAACCAAATTTCTTCTGCAAAAGCTGTTCGCGAAACATTGGCAG 748
.|||||||||||||||.|||||||.|||||.||||||||||||.|.||.|
BPUM_3357___f 699 CACTGAAAACCAAATTGCTTCTGCGAAAGCAGTTCGCGAAACACTTGCTG 748
BSNT_05671___ 749 CTAAGCCTGACGAGTACGATCCACGTAAATACCTTGGACCAGCTCGTGAA 798
|.||..|.||.|||||.||||||||||||||.|||||||||||||||||.
BPUM_3357___f 749 CAAAAACAGAAGAGTATGATCCACGTAAATATCTTGGACCAGCTCGTGAC 798
BSNT_05671___ 799 GCGATCAAAGAAACAGTTATCGGTAAAATGCGTGAATTTGGTTCTTCAAA 848
||.||.||||..||.||||||||.|||||||||||||||||||||||.||
BPUM_3357___f 799 GCAATTAAAGCGACTGTTATCGGCAAAATGCGTGAATTTGGTTCTTCTAA 848
BSNT_05671___ 849 CCAAGCTTAA 858
||||||.|||
BPUM_3357___f 849 CCAAGCATAA 858
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