Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05676 and BPUM_3360

See Amino acid alignment / Visit BSNT_05676 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence dna-align/BSNT_05676___pyrG.1.24716.seq
#    -bsequence dna-align/BPUM_3360___pyrG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05676___pyrG-BPUM_3360___pyrG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05676___pyrG-BPUM_3360___pyrG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05676___pyrG
# 2: BPUM_3360___pyrG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1620
# Identity:    1269/1620 (78.3%)
# Similarity:  1269/1620 (78.3%)
# Gaps:          24/1620 ( 1.5%)
# Score: 4882.5
# 
#
#=======================================

BSNT_05676___      1 ATGACGAAATATATTTTTGTAACCGGGGGAGTTGTATCCTCACTTGGAAA     50
                     |||||.||.||||||||||||||.||.||||||||.||||||||||||||
BPUM_3360___p      1 ATGACAAAGTATATTTTTGTAACAGGAGGAGTTGTTTCCTCACTTGGAAA     50

BSNT_05676___     51 GGGTATTGTAGCAGCTTCATTAGGGCGTTTGCTGAAAAACCGCGGACTGA    100
                     .||.||....||.||.||.|||||.||..|.||||||||..|.||..||.
BPUM_3360___p     51 AGGGATCACGGCTGCCTCGTTAGGCCGCCTTCTGAAAAATAGAGGGATGG    100

BSNT_05676___    101 ACGTGACGATTCAAAAATTCGATCCATACATCAACGTTGACCCGGGAACA    150
                     |.||.||.||||||||||||||||||||.||||||||.|||||.||.||.
BPUM_3360___p    101 ATGTCACCATTCAAAAATTCGATCCATATATCAACGTAGACCCAGGGACG    150

BSNT_05676___    151 ATGAGCCCGTACCAGCACGGTGAAGTATTCGTAACGGATGACGGCGCTGA    200
                     |||||.||.||.||.||||||||.||.|||||.||.||||||||.|||||
BPUM_3360___p    151 ATGAGTCCATATCAACACGGTGAGGTTTTCGTCACAGATGACGGTGCTGA    200

BSNT_05676___    201 AACAGACTTGGACCTTGGTCACTATGAGCGTTTTATCGACATTAACCTGA    250
                     |||||||.|.|||.|.||||||||||||||.||.||.||.|||||..|.|
BPUM_3360___p    201 AACAGACCTTGACTTAGGTCACTATGAGCGCTTCATTGATATTAATTTAA    250

BSNT_05676___    251 ATAAATTCAGCAACGTGACAACAGGTAAAATCTATTCAACAGTTCTTAAA    300
                     ||||.|.|||||||||.|||||.||||||||.||.||.||.|||||.||.
BPUM_3360___p    251 ATAAGTACAGCAACGTCACAACTGGTAAAATATACTCTACTGTTCTGAAG    300

BSNT_05676___    301 AAAGAACGCCGCGGAGATTACCTTGGAGGAACCGTACAGGTCATTCCGCA    350
                     |||||.||||||||.||.||..|.||.|||||.||||||||.|||||.||
BPUM_3360___p    301 AAAGAGCGCCGCGGCGACTATTTAGGCGGAACGGTACAGGTTATTCCCCA    350

BSNT_05676___    351 CATCACAAACGAATTGAAAGACCGTGTTTACCGCGCAGGGAAAGAGACAA    400
                     .||.|||||.|||.|.||||||||.||.|||||.||.||.|||||.|||.
BPUM_3360___p    351 TATTACAAATGAAATCAAAGACCGCGTGTACCGTGCCGGAAAAGAAACAG    400

BSNT_05676___    401 ACGCAGATGTTGTCATTACAGAAATCGGCGGTACTGTCGGAGACATCGAA    450
                     ..||||||||.|||||.||||||||||||||.||.||.||||||||||||
BPUM_3360___p    401 GTGCAGATGTGGTCATCACAGAAATCGGCGGAACAGTTGGAGACATCGAA    450

BSNT_05676___    451 TCACTGCCATTCCTTGAAGCGATCCGCCAAATGAAGAGCGACATCGGCCG    500
                     ||.||.||.|||||.||||||||.||.|||||||||||.|||||.|||||
BPUM_3360___p    451 TCCCTTCCTTTCCTAGAAGCGATTCGACAAATGAAGAGTGACATTGGCCG    500

BSNT_05676___    501 TGAAAACGTAATGTACATCCACTGTACGCTCGTACCTTACATTAAAGCTG    550
                     |||||||||.||||||||.||.|||||.||.||.||||||||...|||.|
BPUM_3360___p    501 TGAAAACGTCATGTACATTCATTGTACCCTTGTTCCTTACATCCGAGCAG    550

BSNT_05676___    551 CTGGCGAATTAAAAACAAAACCGACACAGCACAGCGTAAAAGAATTGCGC    600
                     |.|||||..|.|||||||||||.||||||||.||.|||||||||.|.|||
BPUM_3360___p    551 CAGGCGAGCTGAAAACAAAACCAACACAGCATAGTGTAAAAGAACTTCGC    600

BSNT_05676___    601 AG-CTTGGGCATTCAGCCAAACATCATCGTCGTTCGTACAGAAATGCCGA    649
                     || |||||| ||||||||||||.|.||.||.||..|.||.||||||||.|
BPUM_3360___p    601 AGCCTTGGG-ATTCAGCCAAACGTGATTGTGGTCAGAACTGAAATGCCAA    649

BSNT_05676___    650 TTTCTCAAGATATGAAAGATAAAATCGCGCTTTTCTGCGACATCGATACA    699
                     |..|.|||||.|||||.||.|||||.|||.|.|||||.||.||.||||||
BPUM_3360___p    650 TGACCCAAGACATGAAGGACAAAATTGCGTTATTCTGTGATATTGATACA    699

BSNT_05676___    700 AAAGCGGTTATTGAATGTGAAGATGCGGACAACCTTTACTCCATTCCGCT    749
                     |||||.|||||.|||||..|||||||.||||..||.|||||.||||||||
BPUM_3360___p    700 AAAGCTGTTATCGAATGCCAAGATGCAGACACGCTATACTCTATTCCGCT    749

BSNT_05676___    750 GGAGCTTCAAAAACAAGGGCTTGATAAGCTTGTTTGCGAGCACATGAAAT    799
                     .||..|.|||||||||||..|.||.||||||||.|||||.||.||||||.
BPUM_3360___p    750 TGATTTACAAAAACAAGGATTAGACAAGCTTGTATGCGAACATATGAAAC    799

BSNT_05676___    800 TGGCATGCAAAGAAGCGGAAATGTCCGAGTGGAAAGAGCTTGTTAACAAA    849
                     |.|..|||.||||.||.||.|||.|.|||||||.||.|||.||..|.|||
BPUM_3360___p    800 TTGATTGCCAAGATGCAGACATGACGGAGTGGACAGCGCTAGTCGATAAA    849

BSNT_05676___    850 GTCAGC--AACCTGTCTCAAACGA--TTACAATCGGCCTTGTCGGCAAAT    895
                     ||  ||  ||||  |||||||..|  |.|||||.||.||.||.||.||||
BPUM_3360___p    850 GT--GCAAAACC--TCTCAAAACAAGTCACAATTGGTCTAGTAGGGAAAT    895

BSNT_05676___    896 ACGTTGAGCTTCCTGACGCATACATTTCTGTTGTCGAGTCTCTCCGCCAT    945
                     |.|||||.||.|..||.|||||||||||||||||.||.||.||.||.|||
BPUM_3360___p    896 ATGTTGAACTGCAAGATGCATACATTTCTGTTGTTGAATCACTTCGACAT    945

BSNT_05676___    946 GCGGGCTATGCGTTTGACACAGATGTAAAAGTGAAGTGGATCAACGCGGA    995
                     ||.||.|||||.|||||..||||.||..||.|.||.||||||||.||.||
BPUM_3360___p    946 GCTGGTTATGCATTTGATGCAGACGTTCAAATCAAATGGATCAATGCTGA    995

BSNT_05676___    996 AGAAGTGACAGAAAACAATATCGCAGA--ACTCACAAGCGGAACAGACGG   1043
                     |||||||||||.|.|.|||||.||.||  .|.||||||..|  .||||||
BPUM_3360___p    996 AGAAGTGACAGCAGAAAATATGGCTGATTTCGCACAAGATG--TAGACGG   1043

BSNT_05676___   1044 CATCATTGTGCCGGGCGGATTCGGAGACCGCGGTGTTGAAGGCAAAATCG   1093
                     ||||||.||.||.||.||.||||||||||||||.||.|||||.||||||.
BPUM_3360___p   1044 CATCATCGTTCCTGGAGGCTTCGGAGACCGCGGAGTGGAAGGGAAAATCA   1093

BSNT_05676___   1094 TCGCGACAAAATACGCGCGCGAAAACAACATTCCGTTCTTGGGTATTTGC   1143
                     |.||.|||.||||.||.||.||||||||..|.||.|||||.||.||||||
BPUM_3360___p   1094 TTGCTACACAATATGCTCGTGAAAACAAAGTGCCTTTCTTCGGAATTTGC   1143

BSNT_05676___   1144 TTGGGCATGCAGGTGGCGTCTATTGAATACGCACGAAACGTATTGGGCTT   1193
                     ||.||.|||||.||.|||||.||||||||.||||||||||||.|.|||.|
BPUM_3360___p   1144 TTAGGAATGCAAGTTGCGTCGATTGAATATGCACGAAACGTACTAGGCCT   1193

BSNT_05676___   1194 AAAAGGCGCTCACTCAGCGGAAATTGATCCGTCAACTCAATACCCGATCA   1243
                     ..||||.|||||.|||||||||||||||||...|||...||.|||.||||
BPUM_3360___p   1194 TGAAGGAGCTCATTCAGCGGAAATTGATCCTGAAACAGCATTCCCAATCA   1243

BSNT_05676___   1244 TTGATCTTCTTCCTGAACAAAAGGATGTGGAGGATCTCGGGGGAACGCTT   1293
                     ||||.||||||||.|||||.||||||||.||.|||||.||.|||||.|||
BPUM_3360___p   1244 TTGACCTTCTTCCAGAACAGAAGGATGTAGATGATCTAGGCGGAACACTT   1293

BSNT_05676___   1294 CGTCTCGGCCTTTACCCTTGTAAGCTTGAA-GAAGGCACGAAAGCCTTTG   1342
                     |||||.||.||.||.||.||||| .||.|| ||||.|.|.|||||.||||
BPUM_3360___p   1294 CGTCTTGGTCTATATCCATGTAA-ATTAAATGAAGACTCCAAAGCATTTG   1342

BSNT_05676___   1343 AAGTGTATCAGGATGAAGTGGTGTACGAGCGCCACCGCCACCGCTATGAG   1392
                     .||..||..|.|||||||||||.|||||.|||||||||||.|||||||||
BPUM_3360___p   1343 CAGCATACAACGATGAAGTGGTCTACGAACGCCACCGCCATCGCTATGAG   1392

BSNT_05676___   1393 TTTAACAATGAATTCAGACAGCAAATGGAAG-AGCAAGGCTTCGTATTCT   1441
                     ||.||.||.|||||||||||||||||||||| .|| |||.||.||.||||
BPUM_3360___p   1393 TTCAATAACGAATTCAGACAGCAAATGGAAGCTGC-AGGATTTGTCTTCT   1441

BSNT_05676___   1442 CAGGCACAAGCCCTGATGGACGCCTTGTTGAAATCATCGAGCTGAAAGAC   1491
                     |.||.||||||||.||.|||||.|||||||||||.|||||||||||.||.
BPUM_3360___p   1442 CTGGTACAAGCCCAGACGGACGTCTTGTTGAAATTATCGAGCTGAAGGAT   1491

BSNT_05676___   1492 CATCCTTGGTTCGTGGCTTCTCAGTTCCATCCAGAGTTCAAGTCAAGACC   1541
                     ||.|||||||||.|.||||||||.|||||.|||||.|||...||||||||
BPUM_3360___p   1492 CACCCTTGGTTCCTTGCTTCTCAATTCCACCCAGAATTCGTCTCAAGACC   1541

BSNT_05676___   1542 GACAAGACCTCAGCCTCTATTCAAAGGCTTTATCGGAGCGTCTGTCGAAG   1591
                     |||||||||||||||..||||.|.||..||..|.||.||.||..|..|||
BPUM_3360___p   1542 GACAAGACCTCAGCCATTATTTAGAGATTTCGTTGGTGCTTCACTGCAAG   1591

BSNT_05676___   1592 ---CTGCAAATCAGAAGTAA   1608
                        |||  ||||| ||.|||
BPUM_3360___p   1592 CATCTG--AATCA-AAATAA   1608


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