Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05709 and BPUM_3383
See
Amino acid alignment /
Visit
BSNT_05709 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_05709___argS.1.24716.seq
# -bsequence dna-align/BPUM_3383___argS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05709___argS-BPUM_3383___argS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05709___argS-BPUM_3383___argS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05709___argS
# 2: BPUM_3383___argS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1712
# Identity: 1302/1712 (76.1%)
# Similarity: 1302/1712 (76.1%)
# Gaps: 79/1712 ( 4.6%)
# Score: 4852.0
#
#
#=======================================
BSNT_05709___ 1 ATGAACATTGCGGAACAAATGAAGGACGTGCTGAAAGAAGAAATCAAAGC 50
|||||.||.||.|||||..|.||.||.|.|.|.|||||||||||.|..||
BPUM_3383___a 1 ATGAATATCGCAGAACAGGTCAAAGATGCGTTAAAAGAAGAAATTATCGC 50
BSNT_05709___ 51 GGCCGTTCTGAAAGCGGGACTGGCTGAAGAAAGCCAGATTCCCAATGTTG 100
|||.||..|.|||||.|||||.|||||.|||||||||.|.||..||||..
BPUM_3383___a 51 GGCAGTCGTCAAAGCAGGACTTGCTGATGAAAGCCAGGTACCAGATGTCC 100
BSNT_05709___ 101 TTTTAGAAACACCGAAAGATAAAACACACGGCGACTACTCAACGAATATG 150
||||||||...||||||||.|||||.|||||.||.|||||.||.||||||
BPUM_3383___a 101 TTTTAGAAGTGCCGAAAGACAAAACTCACGGTGATTACTCCACCAATATG 150
BSNT_05709___ 151 GCGATGCAGCTGGCAAGAGTGGCAAAAAAAGCGCCGCGCCAAATCGCTGA 200
|||||||||||.||..|..|.|||||||||||.||.||.||||||||.||
BPUM_3383___a 151 GCGATGCAGCTTGCCCGCATTGCAAAAAAAGCACCTCGTCAAATCGCAGA 200
BSNT_05709___ 201 AGAGATTGTC---GCCCATTTTGATAAAGGAAAGGCTTCGATTGAAAAAC 247
.||.|||||| || .|||||||||||.||.|||||.|||||||||.
BPUM_3383___a 201 GGACATTGTCAAAGC---GTTTGATAAAGGGAAAGCTTCTATTGAAAAAA 247
BSNT_05709___ 248 TGGATATCGCCGGCCCGGGTTTTATCAATTTCTATATGAACAATCAATAT 297
||||||||||.||.||.||.||.||.||.||.||||||||||||||.|||
BPUM_3383___a 248 TGGATATCGCAGGTCCAGGGTTCATTAACTTTTATATGAACAATCAGTAT 297
BSNT_05709___ 298 TTAACAAAGCTGATTCCGTCTGTACTGGAAGCAGGGGAAGCATACGGGGA 347
|||||||||||.||.||..||||.||.||||||..|||||||||.||.||
BPUM_3383___a 298 TTAACAAAGCTCATCCCTGCTGTCCTTGAAGCAAAGGAAGCATATGGTGA 347
BSNT_05709___ 348 AACGAACATCGGAAACGGTGAACGAGTTCAGGTAGAATTCGTATCAGCGA 397
||||||.|..||...|||..||..|||.||.||.||||||||.|||||.|
BPUM_3383___a 348 AACGAATACAGGCGGCGGCCAAAAAGTGCAAGTTGAATTCGTCTCAGCCA 397
BSNT_05709___ 398 ATCCGACGGGAGACCTTCACCTCGGGCATGCGCGCGGGGCGGCTGTCGGC 447
|.||.||.||.|||||||||||.||.|||||.|||||.||.|||||.||.
BPUM_3383___a 398 ACCCAACAGGTGACCTTCACCTTGGACATGCCCGCGGAGCAGCTGTAGGT 447
BSNT_05709___ 448 GATTC-CTTGTGCAACGTGCTTTCAAAAGC-GGGTTACGATGTAAGCCGC 495
||||| ||| ||||||.|.|||...||||| ||||| |||.||.|||||.
BPUM_3383___a 448 GATTCTCTT-TGCAACATCCTTGATAAAGCAGGGTT-CGACGTGAGCCGT 495
BSNT_05709___ 496 GAATACTACATTAACGATGCGGGTAACCAAATCAACAATCTGGCGCTT-- 543
||||||||.||.||||||||.||.||.||.|||||.||.|| |||||
BPUM_3383___a 496 GAATACTATATCAACGATGCAGGGAATCAGATCAATAACCT--CGCTTTA 543
BSNT_05709___ 544 TCTGTTGAAGTCCGTTACTTTGAAGCACTCGGATTGGAAAAACCGATGCC 593
|||||.||.||.|||||||||||.||.|||||..|.||||||..||||||
BPUM_3383___a 544 TCTGTAGAGGTACGTTACTTTGAGGCGCTCGGTCTTGAAAAAGAGATGCC 593
BSNT_05709___ 594 GGAGGATGGCTACCGCGGCGAGGATATCATTGCGATCGG---AAAGCGTC 640
.||.||.||.|||.|.||.||.||.||||..|..||.|| |||| |
BPUM_3383___a 594 TGAAGACGGGTACAGAGGAGAAGACATCAAAGGCATTGGGCAAAAG---C 640
BSNT_05709___ 641 TCGCTGAGGAATACGGTGATCGTTTCGTTAACGA---AGAAGAA-AG--- 683
|.||.||.||||..|||||.||||||||..|||| ||||||| ||
BPUM_3383___a 641 TGGCAGATGAATTTGGTGACCGTTTCGTGCACGAGTCAGAAGAAGAGCGT 690
BSNT_05709___ 684 -TGAACGCCTCGCGTTTTTCCGTGAATACGGCCTGAAATATGAGCTGGAA 732
|||| |||.|||||||||||||||.|||||||.||..||||.
BPUM_3383___a 691 ATGAA--------GTTCTTCCGTGAATACGGCTTGAAATACGAATTGGAG 732
BSNT_05709___ 733 AAGCTTCG-CAAGGACTTGGAAAACTTCCGTGTGCCGTTTGATGTGTGGT 781
||..|.|| ..||..||| ||.||.||||||||.||.||||||||.||||
BPUM_3383___a 733 AAATTACGTGTAGATCTT-GAGAATTTCCGTGTCCCATTTGATGTATGGT 781
BSNT_05709___ 782 ATTCAGAAACTTCACTGTACCAAAATGGAAAAATCGA--CAAGGCGCTTG 829
||||||||||.||..|.||..||||.||||||||||| || |||||.|
BPUM_3383___a 782 ATTCAGAAACCTCTTTATATGAAAACGGAAAAATCGAACCA--GCGCTGG 829
BSNT_05709___ 830 AAGCGCTCCGCGAAAAAGGCCATGTCTATGAAGAAGACGGCGCGACTTGG 879
||.|.||.||||||||||||.||||||.|||||||||.||.||.||.|||
BPUM_3383___a 830 AAACTCTTCGCGAAAAAGGCTATGTCTTTGAAGAAGATGGTGCAACGTGG 879
BSNT_05709___ 880 TTCCGTTCCAC-GACGTTTGGCGATGATAAAGACCGCGTATTGATCAAGA 928
.|.|||||.|| || .|||||||||||.||.||.|||||..|.||.||.|
BPUM_3383___a 880 CTGCGTTCAACTGA-TTTTGGCGATGACAAGGATCGCGTGCTCATTAAAA 928
BSNT_05709___ 929 AGGACGGCACGTACACGTACCTGCTTCCTGATATCGCGTATCATAAGGAC 978
|.|||||||..|.|||.|||.|||||||.||||||||.||||||||.|||
BPUM_3383___a 929 AAGACGGCAGCTTCACTTACTTGCTTCCAGATATCGCATATCATAAAGAC 978
BSNT_05709___ 979 AAGCTTGACCGCGGCTTTGATAAGCTGATCAACGTTTGGGGCGCCGATCA 1028
||..|.|||.|.||||||||..||||.||.|||.||||||||||.||.||
BPUM_3383___a 979 AAATTGGACAGAGGCTTTGACCAGCTCATTAACATTTGGGGCGCGGACCA 1028
BSNT_05709___ 1029 CCACGGCTACATCCCGCGTATGAAAGCGGCAATCGAAGCGCTGGGCTAT- 1077
.||||||||.|||||.||.|||||||||||.||..||||.||.||.|||
BPUM_3383___a 1029 TCACGGCTATATCCCTCGAATGAAAGCGGCGATTCAAGCACTTGGATATC 1078
BSNT_05709___ 1078 ------GAAAAAGGAACGCTTGAAGTAGAAATCATTCAGCTCGTTCACCT 1121
|.|| ||||||||||||||||||||||||||||||.||
BPUM_3383___a 1079 CGGCTGGCAA-------GCTTGAAGTAGAAATCATTCAGCTCGTTCATCT 1121
BSNT_05709___ 1122 TTACAAAAACGGCGAGAAAATGAAAATGAGCAAACGGACCGGTAAAGCCG 1171
.|||||||||||.||.||.|||||.|||||.||.||.||.||.|||||||
BPUM_3383___a 1122 ATACAAAAACGGTGAAAAGATGAAGATGAGTAAGCGTACAGGAAAAGCCG 1171
BSNT_05709___ 1172 TAACGATGCGTGACCTGATTGAAGAAGTCGGCTTGGATGCCGTTCGTTAC 1221
|.||.||||||||.||||||||||||||.|||.|.||||||..||||||.
BPUM_3383___a 1172 TCACCATGCGTGATCTGATTGAAGAAGTAGGCCTAGATGCCACTCGTTAT 1221
BSNT_05709___ 1222 TTCTTTGCGATGCGAAGTGCGGACACCCATATGGATTTTGACTTAGATCT 1271
|||||.||||||.|||||||||..||.||||||||.||||||.|||| ||
BPUM_3383___a 1222 TTCTTCGCGATGAGAAGTGCGGCGACACATATGGACTTTGACCTAGA-CT 1270
BSNT_05709___ 1272 T-GCTGTATCAACATCTAACGAAAACCCTGTGTATTATGCACAATATGCA 1320
| ||..|.||.||.||||||||||||||.|||||.||.|||||||||||.
BPUM_3383___a 1271 TAGCGATTTCTACGTCTAACGAAAACCCCGTGTACTACGCACAATATGCC 1320
BSNT_05709___ 1321 CATGCCCGAATCTGCAGCATGCTTCGCCAAGGGGAAGAGCAGGGACTTAA 1370
|||||..||||.|||||||||||.||.|||||.|||||..|.|| ||
BPUM_3383___a 1321 CATGCGAGAATTTGCAGCATGCTGCGTCAAGGTGAAGAAAAAGG-CT--- 1366
BSNT_05709___ 1371 ACCGGCGGCGGATCTT---------GATTTCAGCCATATTCAATCAGAAA 1411
|| |.|.|..||||| ||||||...||.|||||||||||||
BPUM_3383___a 1367 AC--GAGCCAAATCTTGAAAAAGCAGATTTCTCTCACATTCAATCAGAAA 1414
BSNT_05709___ 1412 AAGAATACGATCTGCTGAAAACGATCGGCGGCTTCCCAGAGGCAGTGGCG 1461
|||||||||||||.|||||||..||.||||||||||||||.|..||.||.
BPUM_3383___a 1415 AAGAATACGATCTTCTGAAAATCATTGGCGGCTTCCCAGAAGTGGTAGCA 1464
BSNT_05709___ 1462 GAAGCAGCGGAAAAACGAATTCCGCACCGTGTCACAAACTATATTTATGA 1511
||||||||.|||||.||.||||||||||||||.||.||||||||||||||
BPUM_3383___a 1465 GAAGCAGCTGAAAAGCGTATTCCGCACCGTGTGACGAACTATATTTATGA 1514
BSNT_05709___ 1512 TCTGGCCTCTGCTCTGCACAGCTTCTACAACGCAGAGAAAGTCATCGACC 1561
.||.||.||.||.||.||||||||||||||.||.|||||.|||||.||..
BPUM_3383___a 1515 CCTTGCATCAGCCCTTCACAGCTTCTACAATGCCGAGAAGGTCATTGATG 1564
BSNT_05709___ 1562 CTGAAAATGAAGAGAAAAGC--CGTGCGCGCCTGGCTTTAATGAAGGCAA 1609
..||||||||| |.||||.| | .||.||.||..|..|.|||||.||||
BPUM_3383___a 1565 TAGAAAATGAA-ACAAAAACAAC-AGCACGTCTTTCACTCATGAAAGCAA 1612
BSNT_05709___ 1610 CGCAAATTACGCTGAACAATGCGCTTCAGCTGATCGGCGTATCGGCTCCG 1659
|.|||||||||||....|||||..|..|.||.||.||.||||||||||||
BPUM_3383___a 1613 CACAAATTACGCTTGCGAATGCATTAAAACTAATTGGTGTATCGGCTCCG 1662
BSNT_05709___ 1660 GAAAAAATGTAA 1671
|||||.||||||
BPUM_3383___a 1663 GAAAAGATGTAA 1674
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.