Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05763 and BPUM_3415

See Amino acid alignment / Visit BSNT_05763 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:20
# Commandline: needle
#    -asequence dna-align/BSNT_05763___eutD.1.24716.seq
#    -bsequence dna-align/BPUM_3415___eutD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05763___eutD-BPUM_3415___eutD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05763___eutD-BPUM_3415___eutD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05763___eutD
# 2: BPUM_3415___eutD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 980
# Identity:     782/980 (79.8%)
# Similarity:   782/980 (79.8%)
# Gaps:          16/980 ( 1.6%)
# Score: 3126.5
# 
#
#=======================================

BSNT_05763___      1 GTGGCAGATTTATTTTCAACAGTGCAAGAAAAAGTAGCTGGAAAAGACGT     50
                     |||||||||.|.|||||||||||.||.|||||.||.||.||.||||..||
BPUM_3415___e      1 GTGGCAGATATTTTTTCAACAGTTCAGGAAAAGGTTGCAGGTAAAGGAGT     50

BSNT_05763___     51 TAAAATTGTATTTCCTGAAGGCTTAGACGAGCGTATTTTAGAAG-CGGTC     99
                     .||.||.||.||||||||.||..|.|||||.||.|||.||..|| ||.||
BPUM_3415___e     51 AAAGATCGTTTTTCCTGAGGGAATGGACGAACGCATTCTAACAGCCGTTC    100

BSNT_05763___    100 AGCAAGCTTGCAGGAAACAAAGTGCTGAATCCGATTGTGATCGG------    143
                     | .||.||.||||....||||||..||.|.||.|||||..|.||      
BPUM_3415___e    101 A-AAAACTAGCAGATGGCAAAGTCTTGCAGCCAATTGTTGTAGGTAAAAC    149

BSNT_05763___    144 -CAATGAAAATGAGATCCAAGCAAAAGCAAAAGAATTGAACCTTACGCTG    192
                      ||| |||..||      |||||||||||||||||||....|||||.||.
BPUM_3415___e    150 TCAA-GAAGTTG------AAGCAAAAGCAAAAGAATTAGGTCTTACACTT    192

BSNT_05763___    193 GACGGCGTTAAGATTTATGATCCTCATACATATGAAGGCATGGAAGACCT    242
                     ||.||.|||.|..|.|||||||||||||||||||||||..|.|||||.||
BPUM_3415___e    193 GATGGTGTTGACGTGTATGATCCTCATACATATGAAGGTTTTGAAGAGCT    242

BSNT_05763___    243 TGTACAAGCATTCGTAGAACGCCGCAAAGGCAAAGCGACAGAAGAACAGG    292
                     |||||||||.|||||.|||.|.||.|||||||||||.||||||||.||.|
BPUM_3415___e    243 TGTACAAGCTTTCGTCGAAAGACGTAAAGGCAAAGCAACAGAAGAGCAAG    292

BSNT_05763___    293 CTCGCAAAGCGTTATTAGACGAGAACTACTTCGGTACAATGCTGGTGTAT    342
                     |..|.|||||.|||.||||.||.||||||||.|||||.|||||.|||||.
BPUM_3415___e    293 CAAGAAAAGCATTACTAGATGAAAACTACTTTGGTACGATGCTTGTGTAC    342

BSNT_05763___    343 AAAGGACTTGCAGACGGACTTGTAAGCGGAGCTGCTCACTCAACTGCTGA    392
                     |||||.||||||.||||||||||.|||||.||.||.||.|||||||||||
BPUM_3415___e    343 AAAGGTCTTGCACACGGACTTGTGAGCGGTGCAGCACATTCAACTGCTGA    392

BSNT_05763___    393 CACTGTCCGCCCGGCTCTTCAAATCATCAAAACAAAAGAAGGCGTGAAAA    442
                     |||.||.|||||.||.|||||||||||.|||||||||||||||||.||.|
BPUM_3415___e    393 CACAGTACGCCCAGCACTTCAAATCATTAAAACAAAAGAAGGCGTAAAGA    442

BSNT_05763___    443 AGACTTCCGGCGTGTTCATCATGGCTCGCGGAGAAGAGCAATACGTATTC    492
                     |.|||||.|||||.||||||||||||||.||.|||||||||||.||.||.
BPUM_3415___e    443 AAACTTCTGGCGTCTTCATCATGGCTCGTGGCGAAGAGCAATATGTGTTT    492

BSNT_05763___    493 GCAGATTGCGCGATCAACATTGCGCCTGACAGCCAAGATCTTGCCGAGAT    542
                     ||.|||||.||.|||||||||||.||.||||||||||||||.||.||.||
BPUM_3415___e    493 GCTGATTGTGCAATCAACATTGCACCAGACAGCCAAGATCTAGCTGAAAT    542

BSNT_05763___    543 TGCGATCGAAAGTGCCAATACGGCAAAAATGTTCGACATTGAGCCTCGCG    592
                     |||.|||||||||||.|||||.||.||||||||||||||.||.||.||.|
BPUM_3415___e    543 TGCCATCGAAAGTGCAAATACAGCCAAAATGTTCGACATCGAACCACGTG    592

BSNT_05763___    593 TGGCAATGCTCAGCTTCTCTACAAAAGGCTCAGCAAAATCTGATGAAACA    642
                     |.||||||||.|||||||||||||||||||||||||||||.||.||||||
BPUM_3415___e    593 TAGCAATGCTTAGCTTCTCTACAAAAGGCTCAGCAAAATCAGACGAAACA    642

BSNT_05763___    643 GAAAAAGTAGCGGATGCAGTGAAAATCGCGAAAGAAAAAGCGCCTGAACT    692
                     |||||||||.|.||.|||||..|.||.||.||||||||.||.|||||.||
BPUM_3415___e    643 GAAAAAGTATCTGAAGCAGTTCAGATTGCAAAAGAAAAGGCACCTGAGCT    692

BSNT_05763___    693 GACACTTGACGGCGAATTCCAATTTGATGCTGCATTTGTTCCATCTGTAG    742
                     ...||||||.||.|||||||||||.|||||.||.||.|||||.||.||||
BPUM_3415___e    693 TGTACTTGATGGAGAATTCCAATTCGATGCAGCTTTCGTTCCTTCAGTAG    742

BSNT_05763___    743 CTGAGAAAAAAGCGCCGGATTCCGAAATCAAAGGGGACGCTAACGTATTC    792
                     |.|.|||||||||.||.|||||||..||.|||||.||.||||.||||||.
BPUM_3415___e    743 CAGCGAAAAAAGCACCAGATTCCGTTATTAAAGGCGATGCTAGCGTATTT    792

BSNT_05763___    793 GTATTCCCAAGCCTTGAAGCAGGAAACATCGGCTATAAAATCGCTCAGCG    842
                     ||.|||||.|||||.|||||.||||||||.|||||.|||||.||.|||||
BPUM_3415___e    793 GTTTTCCCTAGCCTAGAAGCTGGAAACATTGGCTACAAAATTGCACAGCG    842

BSNT_05763___    843 TTTGGGCAACTTTGAAGCGGTAGGTCCAATCCTGCAAGGTTTAAATATGC    892
                     .||.||.|||||||||||.||||||||||||.|||||||.|||||...||
BPUM_3415___e    843 CTTAGGTAACTTTGAAGCTGTAGGTCCAATCTTGCAAGGCTTAAACCAGC    892

BSNT_05763___    893 CTGTAAACGACCTTTCAAGAGGATGTAACGCTGAAGATGTTTACAATCTC    942
                     |.||||||||||||||||||||.|||||.||.|||||.||||||||.||.
BPUM_3415___e    893 CAGTAAACGACCTTTCAAGAGGCTGTAATGCCGAAGACGTTTACAACCTT    942

BSNT_05763___    943 GCATTAATTACAGCGGCGCAAGCACTGTAA    972
                     ||..|.||.|||||.||.||||||||.|||
BPUM_3415___e    943 GCGCTTATCACAGCAGCTCAAGCACTATAA    972


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