Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05766 and BPUM_3416
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_05766___ywfI.1.24716.seq
# -bsequence dna-align/BPUM_3416___ywfI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05766___ywfI-BPUM_3416___ywfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05766___ywfI-BPUM_3416___ywfI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05766___ywfI
# 2: BPUM_3416___ywfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 802
# Identity: 579/802 (72.2%)
# Similarity: 579/802 (72.2%)
# Gaps: 68/802 ( 8.5%)
# Score: 2146.0
#
#
#=======================================
BSNT_05766___ 1 ATGAGTGAACAGCAAATGACGAATGAAGCGGCAAAAACGCTTGACGGCTG 50
|||||.|||||.||.|..||.||||||||.||..||||.||.||||||||
BPUM_3416___y 1 ATGAGCGAACAACATACAACCAATGAAGCAGCTCAAACACTAGACGGCTG 50
BSNT_05766___ 51 GTATGCGCTTCATGATTTCCGCACAATGGATTGGACTTCCTGGAAGCTTC 100
||||||.||.||||||||..|.||..|.||.|||||..|.||||||||.|
BPUM_3416___y 51 GTATGCACTGCATGATTTTAGAACCTTTGACTGGACAGCTTGGAAGCTGC 100
BSNT_05766___ 101 TGTCCAGTGATGAGCGCCAATCTATCATACATGAATTCACTGGGTTGCTT 150
||.|.|||||||||||.|||.|.||..|.|||||.|||||.||..|..|.
BPUM_3416___y 101 TGACAAGTGATGAGCGTCAAGCGATTCTTCATGAGTTCACAGGTCTATTA 150
BSNT_05766___ 151 GAAAAATGGGGCGTAGCCCAAAA------AGAAGGAAAA----GGATCGC 190
||||||||| |||| ||.|.||.|| |||...|
BPUM_3416___y 151 GAAAAATGG----------AAAATAGCTGAGCACGATAAGACTGGAAGCC 190
BSNT_05766___ 191 AAACTCTTTACAGCATCGTCGGCCAAAAAGCTGATTTTATGCTGATGATC 240
||||..|.||.||.||.||||||||||||||.|||.|||||||.|||||.
BPUM_3416___y 191 AAACAATCTATAGTATTGTCGGCCAAAAAGCAGATATTATGCTCATGATT 240
BSNT_05766___ 241 CTTCGTCCTACAATGGAAGAATTAAATCAAATTGAGCTTGAATTCAACAA 290
.|.|||||.||.|||||||||.|.....|||||||.||||||||.|||||
BPUM_3416___y 241 TTGCGTCCAACCATGGAAGAACTGGGCGAAATTGAACTTGAATTTAACAA 290
BSNT_05766___ 291 ATCAAGACTTGCTGAGTTCACCATTCCGGCATACTCCTACGTATCAGTGG 340
..||.||||.||.|||||.||.||.||.||.||.||.|||||.|||||.|
BPUM_3416___y 291 GACACGACTAGCAGAGTTTACGATCCCAGCTTATTCGTACGTTTCAGTAG 340
BSNT_05766___ 341 TAGAGCTGAGCAACTACTTGGCAAGCGG------TGACGGCGATCCTTAC 384
|.||.||.|||||||||||.|||.|.|| ||.|||.|||||||||
BPUM_3416___y 341 TTGAACTTAGCAACTACTTAGCAGGAGGCGGAGATGGCGGAGATCCTTAC 390
BSNT_05766___ 385 GAAAATCCGCATGTGCGCGCGCGCCTTTACCCTGAACTGCCGGAATCAAA 434
||.||.||||||||.||.|||||.||.|||||.||.||.||....||..|
BPUM_3416___y 391 GAGAACCCGCATGTACGTGCGCGTCTATACCCAGAGCTCCCTTCTTCTCA 440
BSNT_05766___ 435 ATATGTATGCTTCTATCCAATGGATAAAAGAAGATCCGGCAACGACAACT 484
|||.||.||||||||||||||||||||||||.|.||||||||.|||||||
BPUM_3416___y 441 ATACGTGTGCTTCTATCCAATGGATAAAAGACGTTCCGGCAATGACAACT 490
BSNT_05766___ 485 GGTATATGCTTTCAATGGAGGAACGCAGAA--ACTTGATGAGAAGCCACG 532
||||.|||||.||.|||||.||.||.| || |||| |||||||||||||
BPUM_3416___y 491 GGTACATGCTCTCCATGGATGAGCGTA-AATCACTT-ATGAGAAGCCACG 538
BSNT_05766___ 533 GTTTAATCGGCCGCAGCTATGCGGGCAAAGTCAAACAGATCATCACCGGC 582
|.|||||.|||||.||||||||.||.|||||.||.||||||||.||.|||
BPUM_3416___y 539 GCTTAATTGGCCGAAGCTATGCTGGAAAAGTAAAGCAGATCATTACAGGC 588
BSNT_05766___ 583 TCTGTCGGCTTTGACGATTACGAGTGGGGCGTTACATTATTCAGCGATGA 632
||.|||||.|||||.|||||.|||||||||||.||..|||||...||.||
BPUM_3416___y 589 TCCGTCGGTTTTGATGATTATGAGTGGGGCGTCACTCTATTCTCTGACGA 638
BSNT_05766___ 633 TGTCCTTCAATTCAAGAAGCTAGTGTACGAAATGCGTTTTGACGAAGTCA 682
|||.|||||||||||.||..|.||.||.||||||||.|||||.|||||||
BPUM_3416___y 639 TGTGCTTCAATTCAAAAAATTGGTTTATGAAATGCGCTTTGATGAAGTCA 688
BSNT_05766___ 683 GCGCTCGCTATGGCGAATTTGGTTCATTCTTTGTCGG------------- 719
|.||.|||||.||||||||.|||||.|||||||||||
BPUM_3416___y 689 GTGCACGCTACGGCGAATTCGGTTCCTTCTTTGTCGGAAACCGATTAGCA 738
BSNT_05766___ 720 --CAATCACCTTTCGCTTGATACACTTCCTCAATTCTTAT----ATGTAT 763
|.|.||.||..|| |||||| ||||||
BPUM_3416___y 739 AACGAGCAGCTGGCG-------------------TCTTATTTTCATGTAT 769
BSNT_05766___ 764 AA 765
.|
BPUM_3416___y 770 GA 771
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