Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05834 and BPUM_3462

See Amino acid alignment / Visit BSNT_05834 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_05834___qoxC.1.24716.seq
#    -bsequence dna-align/BPUM_3462___qoxC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05834___qoxC-BPUM_3462___qoxC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05834___qoxC-BPUM_3462___qoxC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05834___qoxC
# 2: BPUM_3462___qoxC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity:     465/630 (73.8%)
# Similarity:   465/630 (73.8%)
# Gaps:          27/630 ( 4.3%)
# Score: 1655.0
# 
#
#=======================================

BSNT_05834___      1 ATGGAACAT-------GCAGAACACGGCAATTCTAACGCGCCTATGGAAT     43
                     ||||.||||       |||       ||.||.|.||.||.||..|.||||
BPUM_3462___q      1 ATGGGACATAATGATAGCA-------GCTATGCAAATGCACCGCTTGAAT     43

BSNT_05834___     44 ATCAATCTGAAACCGGCAGACTTAATATTCTCGGGTTTTGGATCTTTTTA     93
                     ||||.||||||||.||..|..|.||.|||||.||.||.|||||.||..|.
BPUM_3462___q     44 ATCAGTCTGAAACGGGACGTTTAAACATTCTTGGTTTCTGGATATTCCTT     93

BSNT_05834___     94 GGGGCAGAAATTGTGTTGTTCTCAACACTATTTGCAACCTTCTTCGTTCT    143
                     ||.||.|||||.|||||.|||||||||||.|||||.||||.|||.|||||
BPUM_3462___q     94 GGCGCGGAAATCGTGTTATTCTCAACACTTTTTGCGACCTACTTTGTTCT    143

BSNT_05834___    144 TAAAAACAGAACAGCTGGAGGTGTCTTGCCAGACGAACTATTTGAAGTCA    193
                     |.|...||||||||||||.||.||.||.||||..||.||.|||||..|.|
BPUM_3462___q    144 TCATGGCAGAACAGCTGGCGGCGTTTTACCAGCTGAGCTGTTTGATATGA    193

BSNT_05834___    194 ATCTGGTAATGATTATGACGTTCTTGCTGCTGATCAG--CAGCTTTACCT    241
                     |.||.|||.||||.|||||.|||.||||..||.|.||  ||  |||||.|
BPUM_3462___q    194 AGCTTGTATTGATCATGACATTCCTGCTATTGGTTAGTTCA--TTTACAT    241

BSNT_05834___    242 GCGGGATCGCTGTTCATGAAATGCGCCGCGGAAGTTTAAAAGGCGTAGTC    291
                     |.|||||.||||||||||||||||||||.||||||..||||||.||.|||
BPUM_3462___q    242 GTGGGATTGCTGTTCATGAAATGCGCCGTGGAAGTACAAAAGGGGTTGTC    291

BSNT_05834___    292 ATTTGGACAATTATCACTCTTCTTCTCGGTGCCGGCTTCGTCGGATGCGA    341
                     ||||||||.|||.|.||.||.|||||.|||||.||.||.||.||||..||
BPUM_3462___q    292 ATTTGGACGATTCTTACACTGCTTCTAGGTGCAGGATTTGTTGGATTTGA    341

BSNT_05834___    342 GATCAACGAGTTTGTTCACTATGTACATGAAGGAGCG-GC-TCTCAGTAC    389
                     |.|....|||||..|.||.||||||||.||.||.||| || || || |||
BPUM_3462___q    342 GCTTTTTGAGTTCTTCCATTATGTACACGAGGGTGCGAGCATC-CA-TAC    389

BSNT_05834___    390 AAGTGCGTTCTGGTCTGGATTCTTTGTTTTACTT-GGAACTCACGGAACT    438
                     ||||||||..|||||||.|||||||||..| ||| ||||||||||||...
BPUM_3462___q    390 AAGTGCGTATTGGTCTGCATTCTTTGTACT-CTTAGGAACTCACGGATTA    438

BSNT_05834___    439 CACGTAACAATCGGGATTTTCTGGATCACAGGAATTCTGATTCAGTTGAA    488
                     ||||||.|.|||||.||.||||||||.||.||..|..||.|.||..|.||
BPUM_3462___q    439 CACGTATCTATCGGTATCTTCTGGATTACCGGGGTCTTGTTCCAAATTAA    488

BSNT_05834___    489 GAAACGCGGCTTAACTCCGCAAACTTCATCTAAAATCTTTATCTCAAGCT    538
                     .|||||.||.||||||||.|||||..||||.||.||.|||||||||||..
BPUM_3462___q    489 AAAACGTGGATTAACTCCACAAACAGCATCGAAGATTTTTATCTCAAGTC    538

BSNT_05834___    539 TGTACTGGCACTTCTTAGATGTTGTATGGATTTTCATCTTTACAGGTGTC    588
                     |.||||||||.|||.|.||||||||||||||.||||||||.||||.|||.
BPUM_3462___q    539 TATACTGGCATTTCCTTGATGTTGTATGGATCTTCATCTTCACAGCTGTT    588

BSNT_05834___    589 TATCTCATGGGATTGGGGGG---TCTGTAA    615
                     ||..|.||.|||||.|||||   |.|||.|
BPUM_3462___q    589 TACTTGATCGGATTAGGGGGGCTTTTGTGA    618


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