Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06047 and BPUM_3587
See
Amino acid alignment /
Visit
BSNT_06047 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:36
# Commandline: needle
# -asequence dna-align/BSNT_06047___dra.1.24716.seq
# -bsequence dna-align/BPUM_3587___deoC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06047___dra-BPUM_3587___deoC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06047___dra-BPUM_3587___deoC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06047___dra
# 2: BPUM_3587___deoC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 682
# Identity: 495/682 (72.6%)
# Similarity: 495/682 (72.6%)
# Gaps: 20/682 ( 2.9%)
# Score: 1702.0
#
#
#=======================================
BSNT_06047___ 1 ATGTCATTAGCCAACATAATTGATCATACAGCTTTGAAACCGCATACACA 50
|||.|..||||.||..|.||||||||||||||..|.|||||..|||||..
BPUM_3587___d 1 ATGACGATAGCAAAGCTCATTGATCATACAGCACTAAAACCAGATACATC 50
BSNT_06047___ 51 AAAAGCGGACATTCTAAAACTAATTGAAGAAGCGAAAACATACAAATTTG 100
.|||||.|..|||.|..|..||.||||||||||.||.||..|..|.||||
BPUM_3587___d 51 GAAAGCTGCAATTATGCAGTTACTTGAAGAAGCAAAGACTCATCAGTTTG 100
BSNT_06047___ 101 CTTCAGTATGTGTCAATCCGACATGGGTGGAGCTTGCTGCAAAAGAGCTT 150
|.||.||||||||.|||||.||||||||....|||||.||.|||||.||
BPUM_3587___d 101 CATCCGTATGTGTGAATCCAACATGGGTATCTCTTGCGGCGAAAGAACT- 149
BSNT_06047___ 151 AAG--GGAACTGGAGTCGACGTTTGTACGGTCATCGGCTTCCCGCTCGGT 198
|| |||||.||.||.|||||||||||.||||||||.||||||||.|||
BPUM_3587___d 150 -AGCAGGAACAGGCGTTGACGTTTGTACAGTCATCGGTTTCCCGCTAGGT 198
BSNT_06047___ 199 GCCAATACAACTGAAACAAAAGCGTTCGAAACAAAAGACGCGATTTCAAA 248
||.||.|||||.|.|...|||||.|||||||||||.||.||.||....||
BPUM_3587___d 199 GCAAACACAACAGCAGTGAAAGCATTCGAAACAAAGGATGCCATCGAGAA 248
BSNT_06047___ 249 AGGCGCCACTGAAGTGGATATGGTCATTAATATTGCCGCTTTAAAAGACA 298
.||.||.|||||||||||.|||||.||.||||||||.||.||.||||||.
BPUM_3587___d 249 TGGTGCAACTGAAGTGGACATGGTTATCAATATTGCGGCATTGAAAGACG 298
BSNT_06047___ 299 AGGAAGACGATGTGGTGGAAGC-TGATATCCGCGGTGTAGTGGAAGCTGC 347
..|||.|.||||..||.| ||| .|||||.||.|..||.||.||.||.||
BPUM_3587___d 299 GCGAATATGATGCAGTTG-AGCAAGATATTCGTGCAGTTGTAGACGCGGC 347
BSNT_06047___ 348 AGCCGGAAAAGCGCTTGTCAAAGTCATTATCGAAACGTGCCTTCTGACTG 397
|...||.|||||.|||||.|||||.|||||.|||.|||||.|.||.||.|
BPUM_3587___d 348 AAAAGGGAAAGCACTTGTAAAAGTTATTATTGAAGCGTGCTTACTCACAG 397
BSNT_06047___ 398 ATGAAGAAAAAG----AACGTGCATGCCGTTTAGCGGTGTCTGCGGGAGC 443
|||||||.|||| |.|.|| ||...||| |.|||...||.||.||
BPUM_3587___d 398 ATGAAGAGAAAGTCAAAGCTTG--TGAGCTTT--CAGTGAAAGCTGGCGC 443
BSNT_06047___ 444 GGATTTCGTAAAAACATCAACAGGCTTTTCTACAGGCGGCGCAACGAAGG 493
.|||||.||.||||||||.||.||.|||..||.|||.||.||.||....|
BPUM_3587___d 444 TGATTTTGTGAAAACATCGACTGGATTTAGTAGAGGAGGTGCCACTGCTG 493
BSNT_06047___ 494 AAGATATCGCCTTAATGCGCAAAACAGTAGGACCTGATATCGGCGTGAAA 543
|.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||
BPUM_3587___d 494 AGGACATCGCATTAATGCGTAAAACAGTAGGGCCTGACATCGGTGTGAAA 543
BSNT_06047___ 544 GCATCTGGCGGAATCAGAACGAAAGAAGATGTAGACACAATGGTTGAGGC 593
|||||.|||||..|.|||||.|||||||||||.||..|||||.|.|..||
BPUM_3587___d 544 GCATCCGGCGGTGTGAGAACAAAAGAAGATGTTGAGGCAATGCTAGCTGC 593
BSNT_06047___ 594 TGGTGCAAGCCGAATTGGCGCCAGCGCAGGCGTTTCTATCGTAAAAGGAG 643
.||.||.|.|||||||||.||.||.||||||||||||||..|.|||||.|
BPUM_3587___d 594 AGGCGCTACCCGAATTGGTGCGAGTGCAGGCGTTTCTATTATCAAAGGGG 643
BSNT_06047___ 644 AAAATGCATCAG--GCGGAGACA-ACTATTAA 672
||..||||| .|...||.| ||||||||
BPUM_3587___d 644 ---ATCAATCAGCTCCTTCGAAAGACTATTAA 672
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.