Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06148 and BPUM_3662
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_06148___bglA.1.24716.seq
# -bsequence dna-align/BPUM_3662___bglA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06148___bglA-BPUM_3662___bglA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06148___bglA-BPUM_3662___bglA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06148___bglA
# 2: BPUM_3662___bglA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1461
# Identity: 1127/1461 (77.1%)
# Similarity: 1127/1461 (77.1%)
# Gaps: 45/1461 ( 3.1%)
# Score: 4295.0
#
#
#=======================================
BSNT_06148___ 1 ATGGGAAACA-TGCCGAAGGATTTTTTATGGGGCGGTGCTTTAGCTGCCC 49
||| ||| |.||.||.|||||..||||||||||.||.||||||||.|
BPUM_3662___b 1 ATG----ACATTACCAAAAGATTTCCTATGGGGCGGCGCATTAGCTGCAC 46
BSNT_06148___ 50 ACCAATTTGAAGGCGGATGGAATCAAGGCGGTAAAGGGCCGAGTGTCGTC 99
|.|||||||||||.|||||||||.|||..||.|||||.||.|||||.||.
BPUM_3662___b 47 ATCAATTTGAAGGTGGATGGAATGAAGCAGGAAAAGGTCCAAGTGTTGTG 96
BSNT_06148___ 100 GATGTGATGACAGCGGGTGCGCACGGCGTGCCGAGAAAAATCACGGATAC 149
|||||.||||||||.||.||.||.||.|||||||||.||||.|||||.||
BPUM_3662___b 97 GATGTAATGACAGCCGGAGCCCATGGAGTGCCGAGACAAATTACGGAGAC 146
BSNT_06148___ 150 GATTGAAGAAAACGAATTTTATCCAAACCATGAAGCCATTGATTTCTATC 199
|||.|||||||.|.||||||||||.|||||||||||.||.||||||||.|
BPUM_3662___b 147 GATAGAAGAAAGCAAATTTTATCCGAACCATGAAGCAATCGATTTCTACC 196
BSNT_06148___ 200 ACAGATACAAGGAAGATATCGCTTTGTTTGCGGAAATGGGATTAAAATGC 249
|..|.|||||||||||||||||..|||||||.||||||||.|||||||||
BPUM_3662___b 197 ATCGTTACAAGGAAGATATCGCGATGTTTGCCGAAATGGGCTTAAAATGC 246
BSNT_06148___ 250 CTGCGGACGTCCATCGGCTGGAGCCGGATTTTTCCGAAAGGCGATGAGGC 299
||.||.||.|||||.|||||||||||||||||.||.||.||.|||||.||
BPUM_3662___b 247 CTTCGTACATCCATTGGCTGGAGCCGGATTTTCCCAAAGGGAGATGAAGC 296
BSNT_06148___ 300 TGAACCGAACGAAGCTGGTTTGCAGTTTTATGATGATGTGTTTGATGAAT 349
.||||||||.|||||||||||.||.||.|||||||||||.||.||||||.
BPUM_3662___b 297 GGAACCGAATGAAGCTGGTTTACAATTCTATGATGATGTATTCGATGAAC 346
BSNT_06148___ 350 TGCTGAAGCATGGGATCGAGCCGGTCATTACCCTGTCTCACTTTGAAATG 399
||||.||||||||.||||||||.||.|||||.||||||||||||||.|||
BPUM_3662___b 347 TGCTCAAGCATGGCATCGAGCCTGTAATTACACTGTCTCACTTTGAGATG 396
BSNT_06148___ 400 CCGCTGCACCTGGCAAGAGAATATGGCGGCTTCAGAAACCGGAAAGTCGT 449
|||||.||..|||||||||||||.|||||.|||||||..||.|||||.|.
BPUM_3662___b 397 CCGCTTCATTTGGCAAGAGAATACGGCGGATTCAGAAGTCGAAAAGTGGC 446
BSNT_06148___ 450 GGACTTCTTCGTCAACTTTGCAGATGCTTGCTTTACCCGTTACAAAGAGA 499
|||.|.|||||..||.||.||.||.|..|||||.|..||||||||.||.|
BPUM_3662___b 447 GGAATACTTCGCGAAATTCGCTGAAGTGTGCTTCAATCGTTACAAGGACA 496
BSNT_06148___ 500 AAGTGAAGTACTGGATGACATTTAACGAGATCAACAACCAAATGGATGTG 549
|.||.|.||||||||||||||||||.||.|||||.|||.||||||||||.
BPUM_3662___b 497 AGGTCACGTACTGGATGACATTTAATGAAATCAATAACAAAATGGATGTC 546
BSNT_06148___ 550 AACAATCCGTTGTTCCTATGGACGAATTCAGGTGT---TGTGGTTGGC-- 594
|||||.|||.|||||||||||||.||.|||||.|| |.| |
BPUM_3662___b 547 AACAACCCGCTGTTCCTATGGACAAACTCAGGAGTATCTAT------CAA 590
BSNT_06148___ 595 -GAAAACGAAAACGCCAAGGAGGTCATGTATCAAACGGCACACCACGAAC 643
|||..||||||.|||||.||..|.|||||||||.|.|.|||.||.|||.
BPUM_3662___b 591 AGAAGGCGAAAATGCCAAAGAAATTATGTATCAAGCAGGACATCATGAAT 640
BSNT_06148___ 644 TAGTGGCGAGCGCATTAGCAGTGGCAAAAGGAAAAGACATCAATCCAGAG 693
||.|.||.||.||||..|||||.||||||||.|||||.||||||||.|..
BPUM_3662___b 641 TACTAGCAAGTGCATGGGCAGTAGCAAAAGGCAAAGAAATCAATCCTGCT 690
BSNT_06148___ 694 TTCCAGATCGGGGCCATGGTATCACACGTGCCGATTTATCCTTTCTCCTC 743
||.||.||.||.||.||||||||.|||||.||.||.|||||.|..|||||
BPUM_3662___b 691 TTTCAAATTGGTGCAATGGTATCTCACGTACCAATCTATCCGTATTCCTC 740
BSNT_06148___ 744 CAATCCTAAAGATGTGATGCTGGCTGAAGAAGAAATGAGGCAGCGCTATT 793
.|||||..|.||.||.|||||.|||||||||.|.|||||.||.|||||||
BPUM_3662___b 741 AAATCCAGAGGACGTCATGCTTGCTGAAGAATATATGAGACAACGCTATT 790
BSNT_06148___ 794 TCTTCCCTGATGTGCAGGTGCGCGGTTATTATCCAAGCTACGCGTTGAAG 843
|||||||.||.||.||.||.||.||.||.|||||||||||.||..|.||.
BPUM_3662___b 791 TCTTCCCAGACGTACAAGTTCGGGGCTACTATCCAAGCTATGCACTCAAA 840
BSNT_06148___ 844 GAATTTGAACGCGAAGGCTACAACATCACATTC-----GAAGACGGCGAT 888
|||||.||||||||||||| ||||.|||| |||||.||||||
BPUM_3662___b 841 GAATTCGAACGCGAAGGCT-----ATCAAATTCCGTTTGAAGAAGGCGAT 885
BSNT_06148___ 889 GATGAGATTTTAAGAAACGGAACCGTCGATTA-CTTAGGCTTCAGCTATT 937
||.||.|..||||||||.||.|..||.||||| ||| |||||.|||||.|
BPUM_3662___b 886 GAAGAAAGCTTAAGAAAAGGGAAAGTAGATTATCTT-GGCTTTAGCTACT 934
BSNT_06148___ 938 ACATGTCAACAACTGTGAAAAGCGAT---GTGAAAAATGATAAC-ACTGA 983
|||||||.||.||.||.|||||.||| ||| ..||||||| ||.||
BPUM_3662___b 935 ACATGTCGACGACGGTTAAAAGTGATGCAGTG---TCTGATAACGACGGA 981
BSNT_06148___ 984 CGATATTGTAAATGGCGGCTTGCCGAATGGTGTCGAAAATCCGTACATCA 1033
||.|||||.||.||.|.|.|.|||.||||.||.||.|||||.||.||||
BPUM_3662___b 982 -GACATTGTCAACGGAGCCCTTCCGCATGGAGTAGACAATCCTTATATCA 1030
BSNT_06148___ 1034 CTTCGAGTGACTGGGGATGGGCGATTGATCCAACCGGGCTGAGATATACG 1083
..||.|||||||||||.|||.|.|||||.||.||.||..|.|||||||||
BPUM_3662___b 1031 AATCAAGTGACTGGGGCTGGTCCATTGACCCGACAGGCTTAAGATATACG 1080
BSNT_06148___ 1084 TTAAATCGTTTTTATGACCGATACCAAATCCCGTTATTCATCGTTGAAAA 1133
.|.|||||||||||.||.||.||.|||||||||.|.||.||.||||||||
BPUM_3662___b 1081 CTGAATCGTTTTTACGATCGCTATCAAATCCCGCTCTTTATTGTTGAAAA 1130
BSNT_06148___ 1134 TGGCTTTGGCGCAGTGGAT-ACGCTGGAGGAGGACGG---CAAGGTTCAT 1179
|||.|||||.||..|.||| |.| |||||||.||||| || |||||
BPUM_3662___b 1131 TGGATTTGGTGCCATTGATCAAG-TGGAGGATGACGGTTCCA---TTCAT 1176
BSNT_06148___ 1180 GATCCGGAGCGCATTCAATATTTAAAATCGCATATTGAAGCATTGAAAAA 1229
||.||.||.||.|||||||||.|....||.|||||.||||||.|||||||
BPUM_3662___b 1177 GACCCAGAACGAATTCAATATCTCGCTTCTCATATCGAAGCACTGAAAAA 1226
BSNT_06148___ 1230 AGCGGTCACGTACGATGGTGTTGATTTAATTGGCTACACGCCGTGGGGCA 1279
|||..||...|||||.||||||||..|.|||||||||||.||.|||||.|
BPUM_3662___b 1227 AGCCATCGAATACGACGGTGTTGACCTGATTGGCTACACACCTTGGGGTA 1276
BSNT_06148___ 1280 TTATTGATATTGTCTCCTTCACAACTGGCGAAATGAAAAAACGCTACGGC 1329
|.|||||.||.||.||.||||||||.||.|||||||||||||||||||||
BPUM_3662___b 1277 TCATTGACATCGTGTCTTTCACAACAGGTGAAATGAAAAAACGCTACGGC 1326
BSNT_06148___ 1330 ATGATCTATGTTGATCGTGACAATGAAGGAAACGGATCCATGAAACGATA 1379
||||||||.|||||.||.|||||.|||||.|||||.||.|||.|..||..
BPUM_3662___b 1327 ATGATCTACGTTGACCGCGACAACGAAGGCAACGGCTCAATGGAGAGACT 1376
BSNT_06148___ 1380 TAAGAAAGACTCCTTTGAGTGGTACAAAAATGTCATTCAAACGAACGGCG 1429
.||.|||||.||.|||...|||||..||||.||||||...|||||.||.|
BPUM_3662___b 1377 CAAAAAAGATTCGTTTACTTGGTATCAAAACGTCATTGCCACGAATGGTG 1426
BSNT_06148___ 1430 AGGAACTATAA 1440
|.|||.|.|||
BPUM_3662___b 1427 AAGAAGTGTAA 1437
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