Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06212 and BPUM_3697

See Amino acid alignment / Visit BSNT_06212 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence dna-align/BSNT_06212___dnaC.1.24716.seq
#    -bsequence dna-align/BPUM_3697___dnaC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06212___dnaC-BPUM_3697___dnaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06212___dnaC-BPUM_3697___dnaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06212___dnaC
# 2: BPUM_3697___dnaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1365
# Identity:    1097/1365 (80.4%)
# Similarity:  1097/1365 (80.4%)
# Gaps:           0/1365 ( 0.0%)
# Score: 4413.0
# 
#
#=======================================

BSNT_06212___      1 ATGACAGACCTTCTGAATGACCGGCTTCCTCCGCAAAATATAGAAGCCGA     50
                     |||||.||.|||||..||||||||||.||.||||||||||||||||||||
BPUM_3697___d      1 ATGACGGAACTTCTCGATGACCGGCTGCCGCCGCAAAATATAGAAGCCGA     50

BSNT_06212___     51 ACAAGCCGTGTTAGGCGCTATTTTTTTACAGCCGTCTGCTTTAACACTGG    100
                     .||.|||||.|||||.|||.||||||||.|.||.|||||..|.||.||.|
BPUM_3697___d     51 GCAGGCCGTATTAGGTGCTGTTTTTTTAGAACCATCTGCGCTCACGCTCG    100

BSNT_06212___    101 CTTCAGAAGTATTGATTCCAGATGATTTCTATAGAATGTCCCACCAAAAA    150
                     ||||.||.|||||.||||||||.|||||||||||||||||.||.|||||.
BPUM_3697___d    101 CTTCTGAGGTATTAATTCCAGAGGATTTCTATAGAATGTCGCATCAAAAG    150

BSNT_06212___    151 ATCTATAATGCGATGCTGGTGCTCGGTGACCGAGGTGAACCGGTTGATCT    200
                     ||.||||||||||||||.||.||.|||||..||||.||||||||.|||||
BPUM_3697___d    151 ATTTATAATGCGATGCTTGTACTTGGTGATAGAGGGGAACCGGTCGATCT    200

BSNT_06212___    201 GGTGACGGTAACATCAGAGCTTGCGAACACAGACCTGCTGGAAGAAGTAG    250
                     .||.|||||.|||||.||.||.||.||.|||||..|.||.|||||.||||
BPUM_3697___d    201 TGTTACGGTGACATCTGAACTGGCCAATACAGATTTACTAGAAGAGGTAG    250

BSNT_06212___    251 GCGGCATTTCATATTTGACAGATATTGCAAACTCGGTGCCGACAGCGGCT    300
                     ||||.|||||.|||||.||.||||||||.|||||.||.||.||.||.||.
BPUM_3697___d    251 GCGGGATTTCGTATTTAACCGATATTGCGAACTCTGTCCCAACTGCCGCA    300

BSNT_06212___    301 AACATAGAATATTACGCGAAAATCGTTGAGGAAAAATCGATTCTTCGCCG    350
                     |||||||||||.||.||.|||||.||.||.||.|||||.|||.|..|.||
BPUM_3697___d    301 AACATAGAATACTATGCAAAAATTGTAGAAGAGAAATCCATTTTAAGACG    350

BSNT_06212___    351 ATTAATTAGAACTGCGACAACGATTGCTCAAGACGGGTATACCCGTGAGG    400
                     ..|.||..|.||.||||||||.|||||.||.||.||.||.||.|||||||
BPUM_3697___d    351 TCTGATCCGCACGGCGACAACCATTGCACAGGATGGATACACGCGTGAGG    400

BSNT_06212___    401 ATGAGGTCGAGGATTTACTCAGTGAAGCGGAAAAAACGATTATGGAAGTG    450
                     ||||.||.||||||.|..|.|||||.||.|||||.||.||||||||||||
BPUM_3697___d    401 ATGAAGTAGAGGATCTGTTGAGTGATGCTGAAAAGACCATTATGGAAGTG    450

BSNT_06212___    451 GCACAGCGCAAAAACACGAGTGCCTTCCAAAATATTAAGGACGTCCTTGT    500
                     ||.|||||.||||||.|..|.||.||||||||.|||||||||||.|||||
BPUM_3697___d    451 GCGCAGCGTAAAAACTCAGGAGCTTTCCAAAACATTAAGGACGTGCTTGT    500

BSNT_06212___    501 CCAAACCTATGATAATATCGAACAGCTTCACAATCGAAAAGGTGATATCA    550
                     .||.||.|||||||||||.|||||||||||.||.||||||||.|||||||
BPUM_3697___d    501 TCAGACATATGATAATATTGAACAGCTTCATAACCGAAAAGGCGATATCA    550

BSNT_06212___    551 CGGGGATTCCAACAGGGTTTACAGAGCTTGACCGGATGACTGCGGGTTTT    600
                     |.||||||||||||||.||..|.||||||||.||||||||.||.||.||.
BPUM_3697___d    551 CAGGGATTCCAACAGGTTTCTCCGAGCTTGATCGGATGACAGCTGGATTC    600

BSNT_06212___    601 CAGCGCAACGACTTGATCATTGTGGCTGCCCGTCCGTCAGTAGGGAAAAC    650
                     |||||.||.|||||.||.|||||.||.||.|||||.||||||||||||||
BPUM_3697___d    601 CAGCGAAATGACTTAATTATTGTAGCAGCTCGTCCATCAGTAGGGAAAAC    650

BSNT_06212___    651 AGCCTTTGCCCTGAACATCGCACAAAACGTGGCGACGAAAACCGATGAGA    700
                     .||.||.||..|||||||||||||.||.||.|||||.|||||.||.||.|
BPUM_3697___d    651 GGCTTTCGCATTGAACATCGCACAGAATGTTGCGACCAAAACGGACGAAA    700

BSNT_06212___    701 GCGTCGCGATTTTCAGTCTTGAGATGGGTGCAGAGCAGCTCGTTATGCGT    750
                     |.|||||.||.||.|||.|.||||||||..|.||||||||.|||||||||
BPUM_3697___d    701 GTGTCGCCATCTTTAGTTTAGAGATGGGATCTGAGCAGCTAGTTATGCGT    750

BSNT_06212___    751 ATGCTTTGTGCCGAGGGAAATATCAATGCCCAGAATCTCCGTACAGGTAA    800
                     |||||.|||||.|||||.|||||||||||.||.||.||..|.||.|||||
BPUM_3697___d    751 ATGCTATGTGCTGAGGGGAATATCAATGCACAAAACCTAAGAACCGGTAA    800

BSNT_06212___    801 CCTGACCGAAGAGGATTGGGGCAAGCTGACGATGGCAATGGGAAGCCTGT    850
                     .|||||.||||||||.||||||||||||||.|||||||||||....||.|
BPUM_3697___d    801 TCTGACAGAAGAGGACTGGGGCAAGCTGACAATGGCAATGGGCTCGCTAT    850

BSNT_06212___    851 CGAACAGCGGGATTTACATCGATGATACACCGGGTATTCGGGTGAGCGAA    900
                     |.||.||.|||||||.|||.|||||||||||.||.||..|.||.||.|||
BPUM_3697___d    851 CTAATAGTGGGATTTTCATTGATGATACACCAGGAATCAGAGTAAGTGAA    900

BSNT_06212___    901 ATTCGTGCCAAGTGCCGCCGCTTGAAGCAGGAAAGCGGGCTGGGCATGAT    950
                     |||||..|.||.|||||||||||||||||.||||.|||.||.||.|||||
BPUM_3697___d    901 ATTCGCTCAAAATGCCGCCGCTTGAAGCAAGAAAACGGTCTTGGAATGAT    950

BSNT_06212___    951 TTTGATTGATTACCTGCAATTGATTCAGGGAAGCGGTCGTTCAAAGGACA   1000
                     .||||||||.|||.|.||..|.|||||.||.|||||.||.||||..||.|
BPUM_3697___d    951 CTTGATTGACTACTTACAGCTTATTCAAGGGAGCGGACGATCAAGCGATA   1000

BSNT_06212___   1001 ACCGTCAGCAGGAAGTATCTGAAATTTCCCGTGAACTGAAGTCGATTGCC   1050
                     ||||||||||.||.||.||||||||.||.||.|.|.|.||.|||.|.||.
BPUM_3697___d   1001 ACCGTCAGCAAGAGGTTTCTGAAATCTCTCGGGCATTAAAATCGCTGGCA   1050

BSNT_06212___   1051 AGGGAGCTGCAAGTCCCAGTTATCGCGCTTTCCCAGCTTTCCAGGGGTGT   1100
                     ||||||||..||||.||||||||.||..|.||.||||||||..|.||.||
BPUM_3697___d   1051 AGGGAGCTTGAAGTTCCAGTTATTGCTTTGTCTCAGCTTTCACGTGGAGT   1100

BSNT_06212___   1101 TGAGCAGCGTCAGGATAAACGGCCGATGATGTCTGATATCCGGGAATCAG   1150
                     .||||||||||||||.|||||.|||||||||||||||||.||.|||||||
BPUM_3697___d   1101 AGAGCAGCGTCAGGACAAACGTCCGATGATGTCTGATATTCGTGAATCAG   1150

BSNT_06212___   1151 GAAGTATCGAGCAGGACGCGGATATTGTCGCGTTCCTTTATCGTGATGAC   1200
                     ||||||||||||||||.||.|||||.||.||.|||||||||||||||||.
BPUM_3697___d   1151 GAAGTATCGAGCAGGATGCCGATATCGTGGCATTCCTTTATCGTGATGAT   1200

BSNT_06212___   1201 TACTATGACAAAGAAACCGAGAATAAAAATATTATCGAAATTATTATCGC   1250
                     |||||.||.||||||.|.||||||||.||.|||||.|||||.||.||.||
BPUM_3697___d   1201 TACTACGATAAAGAATCAGAGAATAAGAACATTATTGAAATCATCATTGC   1250

BSNT_06212___   1251 CAAACAGCGTAACGGCCCGGTAGGAACCGTGTCTCTTGCGTTCGTAAAAG   1300
                     ||||||||||||||||||.||.||.||.||.||.||.||||||||.||||
BPUM_3697___d   1251 CAAACAGCGTAACGGCCCAGTGGGTACAGTATCACTGGCGTTCGTCAAAG   1300

BSNT_06212___   1301 AATACAACAAATTCGTCAACCTGGAACGGCGTTTTGATGACGCAGGTGTT   1350
                     ||||.|||||||||||||||||||||.|..|.|||||.||.||.||||||
BPUM_3697___d   1301 AATATAACAAATTCGTCAACCTGGAAAGAAGGTTTGACGATGCGGGTGTT   1350

BSNT_06212___   1351 CCGCCCGGCGCATAA   1365
                     ||||||||.||.|||
BPUM_3697___d   1351 CCGCCCGGTGCTTAA   1365


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