Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06270 and BPUM_3719

See Amino acid alignment / Visit BSNT_06270 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence dna-align/BSNT_06270___ssb.1.24716.seq
#    -bsequence dna-align/BPUM_3719___ssb.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06270___ssb-BPUM_3719___ssb.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06270___ssb-BPUM_3719___ssb.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06270___ssb
# 2: BPUM_3719___ssb
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 550
# Identity:     449/550 (81.6%)
# Similarity:   449/550 (81.6%)
# Gaps:          35/550 ( 6.4%)
# Score: 1916.0
# 
#
#=======================================

BSNT_06270___      1 ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCT     50
                     |||||.|||||.||||||||.|||||||||||.|||||||||||.|||||
BPUM_3719___s      1 ATGCTAAACCGTGTTGTATTGGTCGGAAGACTAACAAAAGACCCTGAGCT     50

BSNT_06270___     51 TCGTTATACGCCAAACGGTGCGGCTGTTGCTACGTTTACTCTTGCTGTGA    100
                     |||.||.|||||.||.|||||||||||.||.|||||||||||.|||||||
BPUM_3719___s     51 TCGCTACACGCCTAATGGTGCGGCTGTAGCCACGTTTACTCTAGCTGTGA    100

BSNT_06270___    101 ATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAAT    150
                     |||||||.||||||||.||.||.|||||.|||||.||||||||||||||.
BPUM_3719___s    101 ATCGTACGTTTACGAATCAATCTGGAGAGCGTGAAGCCGATTTCATTAAC    150

BSNT_06270___    151 TGTGTCACTTGGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAA    200
                     |||||.||||||||||||||||||||.||.||.||.||.|||||||||||
BPUM_3719___s    151 TGTGTTACTTGGAGAAGACAAGCCGAGAATGTGGCTAATTTCTTGAAAAA    200

BSNT_06270___    201 AGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGAAACTATGAAA    250
                     ||||||.|||||.||.|||||.||.|||||.||.||||||||||||||||
BPUM_3719___s    201 AGGAAGTCTTGCCGGTGTAGACGGTCGTTTGCAGACAAGAAACTATGAAA    250

BSNT_06270___    251 ACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTT    300
                     |.||||||||||||||||||||||||||||||||.||||||||.||||||
BPUM_3719___s    251 ATCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTTCAAGCTGAGAGTGTT    300

BSNT_06270___    301 CAATTTCTTGAGCCGAAAAACGGCGGCGGTTCTGGTTCAGGTGGATACAA    350
                     ||||||||||||||.||.|   ||||||||.||||||||||||||||||.
BPUM_3719___s    301 CAATTTCTTGAGCCTAAGA---GCGGCGGTGCTGGTTCAGGTGGATACAG    347

BSNT_06270___    351 CGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGAT-    399
                     ||..||...||...|||||||||||||.|.||||||..|||||||.||| 
BPUM_3719___s    348 CGGCGGTGGCAATAGCGGAGGCCAGTATTATGGCGGTAGCCAAAACGATC    397

BSNT_06270___    400 --AATCCATTTGG------------------------GGGAAATCAAAAC    423
                       |||||||||||                        .||.|||||||.|
BPUM_3719___s    398 AGAATCCATTTGGAAATGAACCAAGTCAAAATCCATATGGCAATCAAAGC    447

BSNT_06270___    424 AACCAGAGA----CGCAATCAGGGGAACAGCTTTAATGATGACCCATTTG    469
                     ||||| |.|    ||.||||||||.||.|||||.||||||||||||||||
BPUM_3719___s    448 AACCA-ACAAAATCGTAATCAGGGAAATAGCTTCAATGATGACCCATTTG    496

BSNT_06270___    470 CCAACGACGGCAAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA    519
                     |.||.|||||.|||||||||||||||||.|||||||||.|.|||||||||
BPUM_3719___s    497 CGAATGACGGTAAACCGATTGACATCTCCGATGATGATTTGCCATTCTAA    546


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