Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06275 and BPUM_3722

See Amino acid alignment / Visit BSNT_06275 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence dna-align/BSNT_06275.1.24716.seq
#    -bsequence dna-align/BPUM_3722.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06275-BPUM_3722.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06275-BPUM_3722.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06275
# 2: BPUM_3722
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity:     158/207 (76.3%)
# Similarity:   158/207 (76.3%)
# Gaps:           0/207 ( 0.0%)
# Score: 594.0
# 
#
#=======================================

BSNT_06275         1 TTGGCGGATAAAGACTTTGGCCTGAATGATATCGTAGAAATGAAAAAACC     50
                     .||||.||.||||..|||||..|..||||..||||.||||||||.|||||
BPUM_3722          1 ATGGCAGACAAAGCGTTTGGGTTACATGACGTCGTTGAAATGAAGAAACC     50

BSNT_06275        51 GCATCCATGCGGAGCGAACAGCTGGAAAATTATACGCATGGGAATGGATA    100
                     .||||||||.||.|..||..|.||||||.|.||.||..||||.|||||||
BPUM_3722         51 CCATCCATGTGGTGTCAATCGGTGGAAAGTGATTCGATTGGGCATGGATA    100

BSNT_06275       101 TTCGAATTAAGTGTGAGGGATGCTCTCACAGTGTTATGATTCCGAGAAGA    150
                     ||||.|||||.|||||.||.|||...||.||.||.||||||||.||||||
BPUM_3722        101 TTCGCATTAAATGTGAAGGCTGCGGGCATAGCGTCATGATTCCCAGAAGA    150

BSNT_06275       151 GAATTTGAAAGAAAACTAAAAAAAGTACTAGTCAAGCATGAGGAGCCTAC    200
                     ||.||||||.|||||.|.||.|||.|.||.|||||||||||||||||.||
BPUM_3722        151 GACTTTGAACGAAAAATGAAGAAAATTCTCGTCAAGCATGAGGAGCCAAC    200

BSNT_06275       201 TTCATAA    207
                     |.|.|||
BPUM_3722        201 TGCTTAA    207


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