Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06287 and BPUM_3732

See Amino acid alignment / Visit BSNT_06287 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence dna-align/BSNT_06287___gidA.1.24716.seq
#    -bsequence dna-align/BPUM_3732___gidA2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06287___gidA-BPUM_3732___gidA2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06287___gidA-BPUM_3732___gidA2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06287___gidA
# 2: BPUM_3732___gidA2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1907
# Identity:    1455/1907 (76.3%)
# Similarity:  1455/1907 (76.3%)
# Gaps:          40/1907 ( 2.1%)
# Score: 5512.0
# 
#
#=======================================

BSNT_06287___      1 ATGGGGTATGAAGCAGGCCAATACGATGTGATTGTGATTGGCGCCGGGCA     50
                     |||||.||||||||.|||.|.||.||.||.||.||..|.||.|||||.||
BPUM_3732___g      1 ATGGGTTATGAAGCTGGCAATTATGACGTCATCGTCGTGGGTGCCGGTCA     50

BSNT_06287___     51 TGCCGGTGTTGAGGCTGCCCTCGCATCTGCACGCCAAGGCGCCAAAACGC    100
                     |||.||.|||||||||||.||.||.||||||.|.||.|||||.|||||.|
BPUM_3732___g     51 TGCTGGGGTTGAGGCTGCTCTTGCTTCTGCAAGACAGGGCGCTAAAACAC    100

BSNT_06287___    101 TTGTCTTGACCATCAACCTAGATATGGTTGCATTTATGCCATGTAATCCG    150
                     ||||.|||||.||||||||.|||||||||||.||||||||||||||||||
BPUM_3732___g    101 TTGTATTGACTATCAACCTCGATATGGTTGCTTTTATGCCATGTAATCCG    150

BSNT_06287___    151 TCTGTCGGCGGCCCCGCAAAAGGGATTGTCGTCCGCGAAATTGACGCGCT    200
                     ||.||.|||||.||.|||||||||||||||||..|.||||||||.||.||
BPUM_3732___g    151 TCCGTAGGCGGTCCTGCAAAAGGGATTGTCGTTAGAGAAATTGATGCACT    200

BSNT_06287___    201 CGGCGGAGAAATGGGAAGAAACATCGATAAAACGCATATTCAAATGAGAA    250
                     .|||||||||||||.|.||||.||.|||||.|||||||||||||||.|.|
BPUM_3732___g    201 GGGCGGAGAAATGGCACGAAATATAGATAAGACGCATATTCAAATGCGCA    250

BSNT_06287___    251 TGCTGAATACAGGAAAAGGTCCTGCGGTTCGTGCATTGCGTGCGCAAGCA    300
                     ||.|||||||.||.|||||.|||||.||||||||.||..|.|||||||||
BPUM_3732___g    251 TGTTGAATACGGGGAAAGGACCTGCTGTTCGTGCTTTAAGAGCGCAAGCA    300

BSNT_06287___    301 GACAAATTCCAATATCAGCACGAAATGAAAAATACGCTTGAAAAAGAACC    350
                     |||||.||||||||||||||.|||||||||||.||..|.|||||.|||||
BPUM_3732___g    301 GACAAGTTCCAATATCAGCATGAAATGAAAAAAACAATGGAAAATGAACC    350

BSNT_06287___    351 AAACTTAACATTGCTGCAAGGAATTGTGGAGCGGCTGATCGTTGAAGACG    400
                     .|||.|.|||.||||||||||.||.|||||.|...|.||.||..||||.|
BPUM_3732___g    351 GAACCTGACAATGCTGCAAGGTATGGTGGATCATTTAATTGTAAAAGATG    400

BSNT_06287___    401 GCGAATGCCGAGGCGTTATTACACAAACCGGCGCACATTATCGTGCGAAA    450
                     ..|||||...|||.|||.||||||||||.||.|||.|.|||||||||||.
BPUM_3732___g    401 ATGAATGTAAAGGTGTTGTTACACAAACAGGGGCAAACTATCGTGCGAAG    450

BSNT_06287___    451 GCAGTTGTCATGACGACAGGGACATATTTAAGAGGACGTATCATTCTTGG    500
                     .|.|||||..|.|||||.||.||.|..||||.|||.||.||.|||.|.||
BPUM_3732___g    451 TCTGTTGTATTAACGACGGGAACTTTCTTAAAAGGTCGCATTATTTTAGG    500

BSNT_06287___    501 TGATCTGTCTTACTCAAGCGGCCCAAATAACCAGCAGCCTTCTATTAAGC    550
                     .|||||.||.||.|||||.||.||.||||||||||||||.|||||.||..
BPUM_3732___g    501 GGATCTATCGTATTCAAGTGGTCCTAATAACCAGCAGCCATCTATCAAAT    550

BSNT_06287___    551 TTTCTGAGC---------ATTTGGAGGAACTTGGTTTTGACCTTGTTCGT    591
                     |.||.||.|         ||||  ||||  ||.|.||||     |||||.
BPUM_3732___g    551 TATCGGATCACCTAGCAGATTT--AGGA--TTCGATTTG-----GTTCGC    591

BSNT_06287___    592 TTTAAAACAGGTACGCCGCCTCGCGTTAAAAGCGACACGATTGATTACAG    641
                     |||||||||||.||.||.|||||.||.||.||..||.|||||||.||.||
BPUM_3732___g    592 TTTAAAACAGGAACACCTCCTCGAGTGAATAGTCACTCGATTGACTATAG    641

BSNT_06287___    642 CAAAACGGAAATTCAGCCTGGTGACGATGTGCCTCGCGCTTTCTCATATG    691
                     .|||||.||||||||.||.|||||.||.||.||.||.||.||.||.||||
BPUM_3732___g    642 TAAAACAGAAATTCAACCAGGTGATGACGTTCCGCGGGCGTTTTCCTATG    691

BSNT_06287___    692 AAACAGTGGAATATATCACAGATCAGCTCCCTTGCTGGCTGACATATACA    741
                     ||||.||.||||||||.|||||.||.|||||.||||||.|.|||||||||
BPUM_3732___g    692 AAACGGTTGAATATATTACAGACCAACTCCCATGCTGGTTAACATATACA    741

BSNT_06287___    742 AGCCCTGAGACACATGAGATTATTGA-CAGCAACCTGCACCGTTCACCGA    790
                     ||....||.||||||.|.|||||||| .|| ||.||.||||||||.||.|
BPUM_3732___g    742 AGTTTAGAAACACATCAAATTATTGATGAG-AATCTTCACCGTTCTCCAA    790

BSNT_06287___    791 TGTATTCCGGTATGATCAAAGGTACGGGCCCAAGATACTGCCCATCCATT    840
                     |||||||.||||||||.|||||.||.||.||.|||||||||||.||||||
BPUM_3732___g    791 TGTATTCAGGTATGATTAAAGGAACTGGTCCTAGATACTGCCCTTCCATT    840

BSNT_06287___    841 GAAGATAAAGTTGTACGATTTAATGATAAACCGCGTCACCAGATCTTCCT    890
                     |||||.|||||.||.||.||.|||||.||||||.|.||.||.||.|||.|
BPUM_3732___g    841 GAAGACAAAGTGGTTCGTTTCAATGACAAACCGAGACATCAAATTTTCTT    890

BSNT_06287___    891 TGAGCCGGAAGGCAGAAATACACAGGAAGTCTATGTCCAAGGTTTATCTA    940
                     .|||||.|||||..|.|||||.||||||||.|||||.|||||.||.||||
BPUM_3732___g    891 AGAGCCAGAAGGTCGTAATACGCAGGAAGTTTATGTTCAAGGATTGTCTA    940

BSNT_06287___    941 CAAGTCTTCCAGAAGACGTACAGCAAAGAATGCTTGCAACGATTCCTGGA    990
                     ||||||||||.||.||.||||||||..|.||||||.||||.||.||.|||
BPUM_3732___g    941 CAAGTCTTCCGGAGGATGTACAGCAGCGCATGCTTTCAACCATCCCAGGA    990

BSNT_06287___    991 CTTGAAAACGTGCAAATGATGAGAGCCGGCTATGCGATCGAGTATGATGC   1040
                     ||.||.||.||.||||||||||||||.||.|||||.||.|||||||||||
BPUM_3732___g    991 CTCGAGAATGTACAAATGATGAGAGCGGGTTATGCCATTGAGTATGATGC   1040

BSNT_06287___   1041 AATCGTACCGACACAGCTCTGGCCGACACTTGAAACAAAAAAAATCACAA   1090
                     |||.||.||.||.|||.|.|||||.|||||.||.||.||.|||||     
BPUM_3732___g   1041 AATTGTGCCTACTCAGTTGTGGCCTACACTCGAGACGAAGAAAAT-----   1085

BSNT_06287___   1091 ACCTT--------TACACTGCAGGCCAAATTAACGGAACTTCCGGTTATG   1132
                        ||        ||.||.||.|||||||||||.||.||.||.||.||||
BPUM_3732___g   1086 ---TTCTGGATTATATACAGCTGGCCAAATTAATGGTACGTCTGGCTATG   1132

BSNT_06287___   1133 AAGAAGCTGCGGGACAAGGGATTATGGCGGGAATCAATGCAGGACGAAAA   1182
                     |.|||||.||.||.|||||.||||||||.||.||.|||||||||.|||||
BPUM_3732___g   1133 AGGAAGCAGCAGGTCAAGGAATTATGGCAGGTATTAATGCAGGAAGAAAA   1182

BSNT_06287___   1183 GCGCTTGGAAAAGAAGAAGTGATTTTAAGCCGTTCTGACGCCTATATTGG   1232
                     ||..|.||.|||||||||||.|||||||||||.|||||.||.|||||.||
BPUM_3732___g   1183 GCATTGGGTAAAGAAGAAGTCATTTTAAGCCGATCTGATGCATATATCGG   1232

BSNT_06287___   1233 TGTTCTGATTGATGACCTTGTGACAAAAGGTACCAATGAGCCATATCGTC   1282
                     ||||||.||||||||.|||||.|||||.||.||.|||||.||.||.||||
BPUM_3732___g   1233 TGTTCTCATTGATGATCTTGTCACAAAGGGAACAAATGAACCTTACCGTC   1282

BSNT_06287___   1283 TTTTGACATCACGTGCGGAATACAGATTGCTGCTTCGCCATGACAATGCT   1332
                     ||||.|||||.|||||.||.||..|.|||||.|||||.|||||||||||.
BPUM_3732___g   1283 TTTTAACATCCCGTGCAGAGTATCGTTTGCTTCTTCGTCATGACAATGCG   1332

BSNT_06287___   1333 GATTTGCGTCTGACAGAAATCGGACACCGCATTGGATTGATTTCTGATGA   1382
                     |||||..|..|.||.|||.|.||..|.|..||||||||.||.|||.|.||
BPUM_3732___g   1333 GATTTAAGATTAACTGAACTTGGCTATCATATTGGATTAATATCTCAAGA   1382

BSNT_06287___   1383 GCGCTATGC--GGCTTTTGAGAAGAAAAAAGCGGCGATCGAGGCGGAGAA   1430
                     ..|  ||.|  .||.||..||.|||||||||..||.||.||.||.|||||
BPUM_3732___g   1383 AAG--ATTCCAAGCATTCCAGCAGAAAAAAGAAGCCATTGAAGCAGAGAA   1430

BSNT_06287___   1431 AAAACGTCTTCATTCTGTAATTATCAAGCCGTCTCCGGAAAATCAAGAAT   1480
                     |||||||.|..||||.||.||.|||||.||..|..|.||.|..|||||.|
BPUM_3732___g   1431 AAAACGTTTATATTCAGTCATCATCAAACCTACAGCTGAGACACAAGAGT   1480

BSNT_06287___   1481 ATATCCGTTCTCTTGGCGGAAGCGAATTGAAAGATGGAGTTCGCGGCACA   1530
                     .|||.|||||.|||||.|||||.||..||||.||.||..||||.|..|..
BPUM_3732___g   1481 TTATTCGTTCACTTGGTGGAAGTGAGCTGAAGGACGGTATTCGTGCTAGT   1530

BSNT_06287___   1531 GACTTGATGAAGCGTCCTGAAATGAACTATGAAACAGTCACAAAACTGGC   1580
                     ||.||||||||||||||.|||||||||||||||.||||....|.|.|.||
BPUM_3732___g   1531 GATTTGATGAAGCGTCCAGAAATGAACTATGAATCAGTTGTGAGATTAGC   1580

BSNT_06287___   1581 GCCGCCAGAAGTGCCAGTTCCTCAAGACGTGGCAGAACAAGTAGAAATCC   1630
                     .||..|.|||...||..|||||...||.|||...||.||.|||||.||.|
BPUM_3732___g   1581 TCCTGCTGAAACTCCGCTTCCTTCTGATGTGTGTGAGCAGGTAGAGATTC   1630

BSNT_06287___   1631 AAGTGAAATATGAAGGATATATTGAAAAATCTCTTCAGCAAGTGGAAAAA   1680
                     ||.|.|||||.|||||.|||||.|||||.||.||.||.|||||.|||||.
BPUM_3732___g   1631 AAATTAAATACGAAGGTTATATCGAAAAGTCACTCCAACAAGTTGAAAAG   1680

BSNT_06287___   1681 CTGAAGAAGATGGAAAATAAAAAAATTCCAGATCGAATTGATTATGACGC   1730
                     |||||.||||||||.||||||||.|||||.|||||.|||||||||||.||
BPUM_3732___g   1681 CTGAAAAAGATGGAGAATAAAAAGATTCCTGATCGTATTGATTATGATGC   1730

BSNT_06287___   1731 AATTAAGGGGATTGCGACCGAGGCGCGTCAAAAACTGAAAAATGTACGGC   1780
                     .||.||.||.|||||.||.||.|||...|||||..|||||.|.||.||.|
BPUM_3732___g   1731 CATCAAAGGAATTGCAACTGAAGCGAAACAAAAGTTGAAAGAAGTCCGAC   1780

BSNT_06287___   1781 CTTTGTCTGTTGCCCAAGCTTCCCGCATTTCCGGTGTAAACCCGGCGGAC   1830
                     |..|.||||||||.||.|||||.||.|||||.||.||.|||||.||.||.
BPUM_3732___g   1781 CGCTTTCTGTTGCACAGGCTTCTCGTATTTCAGGCGTTAACCCTGCTGAT   1830

BSNT_06287___   1831 ATTTCAATTCTATTGGTGTATTTAGAGCAGGGACGCATTGCGAAGATAGC   1880
                     |||||.||.||.||.||.|||||||||||||||||.||||||||||||||
BPUM_3732___g   1831 ATTTCTATCCTTTTAGTATATTTAGAGCAGGGACGTATTGCGAAGATAGC   1880

BSNT_06287___   1881 CGAATAG   1887
                     .||||||
BPUM_3732___g   1881 AGAATAG   1887


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