Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00021 and BSU00080

See Amino acid alignment / Visit BSNT_00021 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:50
# Commandline: needle
#    -asequence dna-align/BSNT_00021___yaaC.1.22522.seq
#    -bsequence dna-align/BSU00080___yaaC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00021___yaaC-BSU00080___yaaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00021___yaaC-BSU00080___yaaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00021___yaaC
# 2: BSU00080___yaaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 948
# Identity:     942/948 (99.4%)
# Similarity:   942/948 (99.4%)
# Gaps:           0/948 ( 0.0%)
# Score: 4686.0
# 
#
#=======================================

BSNT_00021___      1 ATGACATATCATGAGTGGAAAGACTTAGCGCTATTTTACTCCGTTGAATC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya      1 ATGACATATCATGAGTGGAAAGACTTAGCGCTATTTTACTCCGTTGAATC     50

BSNT_00021___     51 AACCCAGAAATTTCTAGAAAAGGTTTATATCTTAAACGGTATTGACGATG    100
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU00080___ya     51 AACCCAGAAATTTCTAGAAAAGGTTTATATCTTAAACGGTATTAACGATG    100

BSNT_00021___    101 CGAAAAAAAACTCTTTTAAAAACAGTGAACGGTTTATTTATTTCTTAAAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    101 CGAAAAAAAACTCTTTTAAAAACAGTGAACGGTTTATTTATTTCTTAAAG    150

BSNT_00021___    151 CATGCCGAATCGTTTTATAAACAAGCCGCATATTCTCCCTTAGAAATCAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    151 CATGCCGAATCGTTTTATAAACAAGCCGCATATTCTCCCTTAGAAATCAA    200

BSNT_00021___    201 ACCGATTCTTTTATTTTATGGAATGGCACAGCTTATCAAAGCATGCTTAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    201 ACCGATTCTTTTATTTTATGGAATGGCACAGCTTATCAAAGCATGCTTAA    250

BSNT_00021___    251 TTACACGTGATCCTCATTATCCAAGCCATACATCAGTACTGGCACATGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    251 TTACACGTGATCCTCATTATCCAAGCCATACATCAGTACTGGCACATGGC    300

BSNT_00021___    301 GTAACAACAAGAAAACGAAAGAAACAAAATTATTGTTTTAGCGATGATGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU00080___ya    301 GTAACAACAAGAAAACGAAAGAAACAAAATTATTGTTTTAGCGACGATGA    350

BSNT_00021___    351 AGTGAAAATACAACGAAATGGACTATGCGTGCATTTTATGAAACATTTAT    400
                     |||||||||||||||.|||||.||||||||.|||||||||||||||||||
BSU00080___ya    351 AGTGAAAATACAACGGAATGGCCTATGCGTACATTTTATGAAACATTTAT    400

BSNT_00021___    401 TCGGACAATCGGATATAGTAGATGAACGGTATACCATGAAAAAATTATTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    401 TCGGACAATCGGATATAGTAGATGAACGGTATACCATGAAAAAATTATTA    450

BSNT_00021___    451 ATGGCCATTCCAGAACTTAGCGATATTTTCTACTTTCAGCAGAAAGAACG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    451 ATGGCCATTCCAGAACTTAGCGATATTTTCTACTTTCAGCAGAAAGAACG    500

BSNT_00021___    501 ATTTATGACAAAAGTTGAGAAGGATAAGAACGAAATTTTTGTACCGGAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    501 ATTTATGACAAAAGTTGAGAAGGATAAGAACGAAATTTTTGTACCGGAGG    550

BSNT_00021___    551 AAGTAGTAATCAATTACAAAATGTCTGATTCAAGGTTTGCTGAATACATG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    551 AAGTAGTAATCAATTACAAAATGTCTGATTCAAGGTTTGCTGAATACATG    600

BSNT_00021___    601 TCCCATCATTATCAATGGTCTTTTACAAAAAAAAATGAACACGGGCTGCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    601 TCCCATCATTATCAATGGTCTTTTACAAAAAAAAATGAACACGGGCTGCT    650

BSNT_00021___    651 GTTCGAAATTTCACCACAAGACAAGGAGCCATGGACATCGACCAGCTTAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    651 GTTCGAAATTTCACCACAAGACAAGGAGCCATGGACATCGACCAGCTTAT    700

BSNT_00021___    701 TGTTTGACATGGAAAAGAACCAATATTATATCCCTTCTCAAAGGGAGCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    701 TGTTTGACATGGAAAAGAACCAATATTATATCCCTTCTCAAAGGGAGCAA    750

BSNT_00021___    751 TTTCTGAGGCTTCCCGAAATGACAATTCATTATTTGATTTTGTACAACGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    751 TTTCTGAGGCTTCCCGAAATGACAATTCATTATTTGATTTTGTACAACGT    800

BSNT_00021___    801 TGGGATGATTGCAAGGTATGAAACAGAATGGTGGTATGAGTTATTAACAC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    801 TGGGATGATTGCAAGGTATGAAACAGAATGGTGGTATGAGTTATTAACAC    850

BSNT_00021___    851 AGCATATAAGTGATGACTACGTGTTAATTCAGCAGTTTTTATTAGTAACA    900
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU00080___ya    851 AGCATATAAGTGATGACTACGTGTTAATTCAGCAGTTTTTATTAGTATCA    900

BSNT_00021___    901 GAAAAGAAATTCCCTAAATACGCTTCACAGTTTCTTCTTCATTTTTAA    948
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU00080___ya    901 GAAAAGAAATTCCCTAAATACGCTTCACAGTTTCTTCTTCATTTTTAA    948


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