Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00031 and BSU00140

See Amino acid alignment / Visit BSNT_00031 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:52
# Commandline: needle
#    -asequence dna-align/BSNT_00031___dck.1.22522.seq
#    -bsequence dna-align/BSU00140___dck.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00031___dck-BSU00140___dck.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00031___dck-BSU00140___dck.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00031___dck
# 2: BSU00140___dck
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity:     650/654 (99.4%)
# Similarity:   650/654 (99.4%)
# Gaps:           0/654 ( 0.0%)
# Score: 3234.0
# 
#
#=======================================

BSNT_00031___      1 ATGAAGGAACATCATATCCCTAACAATTCAATTATTACAGTAGCAGGAAC     50
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00140___dc      1 ATGAAGGAACATCATATCCCTAAGAATTCAATTATTACAGTAGCAGGAAC     50

BSNT_00031___     51 AGTAGGTGTCGGAAAATCGACTTTAACAAAAACTTTAGCTAAACGGCTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc     51 AGTAGGTGTCGGAAAATCGACTTTAACAAAAACTTTAGCTAAACGGCTTG    100

BSNT_00031___    101 GATTTAAAACATCGTTGGAGGAAGTCGATCATAATCCATACTTGGAAAAG    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU00140___dc    101 GATTTAAAACATCGTTGGAGGAAGTCGATCATAATCCATATTTGGAAAAG    150

BSNT_00031___    151 TTCTATCATGATTTTGAACGTTGGAGCTTTCACCTTCAAATTTACTTCTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    151 TTCTATCATGATTTTGAACGTTGGAGCTTTCACCTTCAAATTTACTTCTT    200

BSNT_00031___    201 AGCTGAACGCTTCAAAGAACAGAAAACAATTTTTGAAGCCGGCGGAGGTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    201 AGCTGAACGCTTCAAAGAACAGAAAACAATTTTTGAAGCCGGCGGAGGTT    250

BSNT_00031___    251 TTGTACAGGATCGTTCGATTTATGAAGATACAGGAATTTTCGCAAAAATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    251 TTGTACAGGATCGTTCGATTTATGAAGATACAGGAATTTTCGCAAAAATG    300

BSNT_00031___    301 CATGCTGATAAAGGGACAATGTCAAAGGTTGATTATAAGACTTACACAAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    301 CATGCTGATAAAGGGACAATGTCAAAGGTTGATTATAAGACTTACACAAG    350

BSNT_00031___    351 CCTTTTCGAAGCAATGGTAATGACACCGTATTTCCCACACCCAGATGTGT    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU00140___dc    351 CCTTTTCGAAGCAATGGTAATGACACCGTATTTCCCACATCCAGATGTGT    400

BSNT_00031___    401 TGATCTATTTAGAAGGAGATCTGGAGAACATTTTAAACCGGATTGAACAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    401 TGATCTATTTAGAAGGAGATCTGGAGAACATTTTAAACCGGATTGAACAA    450

BSNT_00031___    451 CGCGGCCGTGAGATGGAGCTTCAGACAAGCAGGTCTTATTGGGAAGAAAT    500
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU00140___dc    451 CGCGGCCGTGAGATGGAGCTTCAGACAAGCCGGTCTTATTGGGAAGAAAT    500

BSNT_00031___    501 GCATACACGCTACGAGAACTGGATAAGCGGTTTTAATGCCTGCCCTGTTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    501 GCATACACGCTACGAGAACTGGATAAGCGGTTTTAATGCCTGCCCTGTTT    550

BSNT_00031___    551 TAAAACTTCGCATTGAAGATTATGATCTTCTGAACGACGAAAACTCGATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    551 TAAAACTTCGCATTGAAGATTATGATCTTCTGAACGACGAAAACTCGATT    600

BSNT_00031___    601 GAAAATATTGTAGATCAAATTGCTTCAGTTATTCATGATAATCAAAAAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00140___dc    601 GAAAATATTGTAGATCAAATTGCTTCAGTTATTCATGATAATCAAAAAAA    650

BSNT_00031___    651 GTGA    654
                     ||||
BSU00140___dc    651 GTGA    654


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