Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00062 and BSU00300

See Amino acid alignment / Visit BSNT_00062 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:54
# Commandline: needle
#    -asequence dna-align/BSNT_00062___yaaR.1.22522.seq
#    -bsequence dna-align/BSU00300___yaaR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00062___yaaR-BSU00300___yaaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00062___yaaR-BSU00300___yaaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00062___yaaR
# 2: BSU00300___yaaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     438/441 (99.3%)
# Similarity:   438/441 (99.3%)
# Gaps:           0/441 ( 0.0%)
# Score: 2178.0
# 
#
#=======================================

BSNT_00062___      1 GTGAAAATTAATAAAGATATACGTACATTTATAGATAATAAGCAGATTCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00300___ya      1 GTGAAAATTAATAAAGATATACGTACATTTATAGATAATAAGCAGATTCC     50

BSNT_00062___     51 CTCTGTGAAAACATCTGAGATCACGGCATCGTTTAAAACATCAATGGAAA    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU00300___ya     51 CTCTGTGAAAACATCTGAGATCACAGCATCGTTTAAAACATCAATGGAAA    100

BSNT_00062___    101 ACCAAAGCAGCAAAATGAAGCTTGATCAGCTTACCAGGCTGTTATCTGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00300___ya    101 ACCAAAGCAGCAAAATGAAGCTTGATCAGCTTACCAGGCTGTTATCTGAT    150

BSNT_00062___    151 ATAGAAGCATTCGGAAAAAGGCTAACGAAATCTCGGAATTTTAAAGACTT    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU00300___ya    151 ATAGAAGCATTTGGAAAAAGGCTAACGAAATCTCGGAATTTTAAAGACTT    200

BSNT_00062___    201 AGCGAGATTTAAAGGACTTGTGAAACGTTTTGTCAAAGAAGCTGTGGACA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00300___ya    201 AGCGAGATTTAAAGGACTTGTGAAACGTTTTGTCAAAGAAGCTGTGGACA    250

BSNT_00062___    251 GCGGCCTTTCACATGAAACATCGAAAAGCTTTGACCTTTACGGGAACAGC    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU00300___ya    251 GCGGTCTTTCACATGAAACATCGAAAAGCTTTGACCTTTACGGGAACAGC    300

BSNT_00062___    301 AGAACGCTGGGACTTGTGAAAGAAATAGATGACAAATTGATACAGCTTAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00300___ya    301 AGAACGCTGGGACTTGTGAAAGAAATAGATGACAAATTGATACAGCTTAC    350

BSNT_00062___    351 GGAAGAGATGATGGATCAGGAAAAACCGGCAATTGATTTGCTGGAGCGTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00300___ya    351 GGAAGAGATGATGGATCAGGAAAAACCGGCAATTGATTTGCTGGAGCGTA    400

BSNT_00062___    401 TTGGCGAAATAAAAGGTTTATTAATTAACCTTTACACATAG    441
                     |||||||||||||||||||||||||||||||||||||||||
BSU00300___ya    401 TTGGCGAAATAAAAGGTTTATTAATTAACCTTTACACATAG    441


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