Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00066 and BSU00330

See Amino acid alignment / Visit BSNT_00066 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:54
# Commandline: needle
#    -asequence dna-align/BSNT_00066___yabA.1.22522.seq
#    -bsequence dna-align/BSU00330___yabA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00066___yabA-BSU00330___yabA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00066___yabA-BSU00330___yabA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00066___yabA
# 2: BSU00330___yabA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity:     359/360 (99.7%)
# Similarity:   359/360 (99.7%)
# Gaps:           0/360 ( 0.0%)
# Score: 1791.0
# 
#
#=======================================

BSNT_00066___      1 TTGGATAAAAAAGAGTTATTTGATACAGTCATTAACTTAGAAGAACAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00330___ya      1 TTGGATAAAAAAGAGTTATTTGATACAGTCATTAACTTAGAAGAACAAAT     50

BSNT_00066___     51 TGGCTCACTGTACCGGCAGCTGGGGGATTTGAAGCAGCATATCGGTGAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00330___ya     51 TGGCTCACTGTACCGGCAGCTGGGGGATTTGAAGCAGCATATCGGTGAGA    100

BSNT_00066___    101 TGATTGAGGAAAATCATCATTTACAGCTTGAAAACAAGCATTTGCGCAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00330___ya    101 TGATTGAGGAAAATCATCATTTACAGCTTGAAAACAAGCATTTGCGCAAA    150

BSNT_00066___    151 CGGCTGGACGATACGACGCAGCAGATTGAAAAGTTCAAAGCTGATAAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00330___ya    151 CGGCTGGACGATACGACGCAGCAGATTGAAAAGTTCAAAGCTGATAAAAA    200

BSNT_00066___    201 AGAATCAAAAACACAGAAGACGGAGCAAACTGATATAGGGGAAGGATATG    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU00330___ya    201 AGAATCAAAAACACAGAAGACAGAGCAAACTGATATAGGGGAAGGATATG    250

BSNT_00066___    251 ATAATCTGGCACGTCTGTATCAAGAAGGATTTCATATCTGCAATGTCCAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00330___ya    251 ATAATCTGGCACGTCTGTATCAAGAAGGATTTCATATCTGCAATGTCCAC    300

BSNT_00066___    301 TATGGAAGTGTTCGAAAAGAGGATTGTCTTTTCTGTCTGTCATTCTTAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00330___ya    301 TATGGAAGTGTTCGAAAAGAGGATTGTCTTTTCTGTCTGTCATTCTTAAA    350

BSNT_00066___    351 TAAAAAATAG    360
                     ||||||||||
BSU00330___ya    351 TAAAAAATAG    360


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