Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00081 and BSU00450

See Amino acid alignment / Visit BSNT_00081 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:56
# Commandline: needle
#    -asequence dna-align/BSNT_00081.1.22522.seq
#    -bsequence dna-align/BSU00450___sspF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00081-BSU00450___sspF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00081-BSU00450___sspF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00081
# 2: BSU00450___sspF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity:     162/186 (87.1%)
# Similarity:   162/186 (87.1%)
# Gaps:          21/186 (11.3%)
# Score: 798.0
# 
#
#=======================================

BSNT_00081         1 ---------------------ATGTCAGATGAGTTTAAATATGAGCTGGC     29
                                          |||||||||||||||||||||||||||||
BSU00450___ss      1 TTGGGCAGACGTCGTGGAGTTATGTCAGATGAGTTTAAATATGAGCTGGC     50

BSNT_00081        30 TAAAGACCTTGGTTTTTATGACACAGTAAAAAATGGCGGCTGGGGCGAAA     79
                     ||||||||||||||||||||||||||||||||||||.||||||||.||||
BSU00450___ss     51 TAAAGACCTTGGTTTTTATGACACAGTAAAAAATGGAGGCTGGGGTGAAA    100

BSNT_00081        80 TTCGGGCTCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCC    129
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU00450___ss    101 TTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCC    150

BSNT_00081       130 GAACAGCAAATGGCTCAGAATCAGAATAACCGATAA    165
                     ||||||||||||||||||||||||||||||||||||
BSU00450___ss    151 GAACAGCAAATGGCTCAGAATCAGAATAACCGATAA    186


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