Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00087 and BSU00500

See Amino acid alignment / Visit BSNT_00087 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:57
# Commandline: needle
#    -asequence dna-align/BSNT_00087___gcaD.1.22522.seq
#    -bsequence dna-align/BSU00500___gcaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00087___gcaD-BSU00500___gcaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00087___gcaD-BSU00500___gcaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00087___gcaD
# 2: BSU00500___gcaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1371
# Identity:    1364/1371 (99.5%)
# Similarity:  1364/1371 (99.5%)
# Gaps:           0/1371 ( 0.0%)
# Score: 6792.0
# 
#
#=======================================

BSNT_00087___      1 ATGGATAAGCGGTTTGCAGTTGTTTTAGCGGCTGGACAAGGAACGAGAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc      1 ATGGATAAGCGGTTTGCAGTTGTTTTAGCGGCTGGACAAGGAACGAGAAT     50

BSNT_00087___     51 GAAATCGAAGCTTTATAAAGTCCTTCATCCAGTTTGCGGTAAGCCTATGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc     51 GAAATCGAAGCTTTATAAAGTCCTTCATCCAGTTTGCGGTAAGCCTATGG    100

BSNT_00087___    101 TAGAGCACGTCGTGGACGAAGCCTTAAAATTATCTTTATCGAAGCTTGTC    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU00500___gc    101 TAGAGCACGTCGTGGACGAAGCCTTAAAATTATCTTTATCAAAGCTTGTC    150

BSNT_00087___    151 ACGATTGTCGGACATGGTGCGGAAGAAGTGAAAAAGCAGCTTGGTGATAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    151 ACGATTGTCGGACATGGTGCGGAAGAAGTGAAAAAGCAGCTTGGTGATAA    200

BSNT_00087___    201 AAGCGAGTACGCGCTTCAAGCAGAACAGCTTGGCACTGCTCATGCTGTAA    250
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU00500___gc    201 AAGCGAGTACGCGCTTCAAGCAAAACAGCTTGGCACTGCTCATGCTGTAA    250

BSNT_00087___    251 AACAGGCACAGCCATTTCTTGCTGACGAAAAAGGCGTCACAATTGTCATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    251 AACAGGCACAGCCATTTCTTGCTGACGAAAAAGGCGTCACAATTGTCATT    300

BSNT_00087___    301 TGCGGAGATACGCCGCTTTTGACAGCAGAGACGATGGAACAGATGCTGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    301 TGCGGAGATACGCCGCTTTTGACAGCAGAGACGATGGAACAGATGCTGAA    350

BSNT_00087___    351 AGAACATGCACAAAGAGAAGCGAAAGCTACGATTTTAACTGCGGTTGCAG    400
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    351 AGAACATACACAAAGAGAAGCGAAAGCTACGATTTTAACTGCGGTTGCAG    400

BSNT_00087___    401 AAGATCCAACTGGATACGGCCGCATTATTCGCAGCGAAAACGGAGCGGTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    401 AAGATCCAACTGGATACGGCCGCATTATTCGCAGCGAAAACGGAGCGGTT    450

BSNT_00087___    451 CAAAAAATCGTTGAGCATAAGGACGCCTCTGAAGAAGAACGTCTTGTAAC    500
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    451 CAAAAAATAGTTGAGCATAAGGACGCCTCTGAAGAAGAACGTCTTGTAAC    500

BSNT_00087___    501 TGAGATCAACACCGGTACGTATTGTTTTGACAATGAAGCGCTATTTCGGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    501 TGAGATCAACACCGGTACGTATTGTTTTGACAATGAAGCGCTATTTCGGG    550

BSNT_00087___    551 CTATTGATCAGGTGTCTAATGATAATGCCCAAGGCGAGTATTATTTGCCG    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU00500___gc    551 CTATTGATCAGGTGTCTAATGATAATGCACAAGGCGAGTATTATTTGCCG    600

BSNT_00087___    601 GATGTCATAGAGATTCTTAAAAATGAAGGCGAAACTGTTGCCGCTTACCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    601 GATGTCATAGAGATTCTTAAAAATGAAGGCGAAACTGTTGCCGCTTACCA    650

BSNT_00087___    651 GACTGGTAATTTCCAAGAAACGCTCGGAGTTAATGATAGAGTTGCTCTTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    651 GACTGGTAATTTCCAAGAAACGCTCGGAGTTAATGATAGAGTTGCTCTTT    700

BSNT_00087___    701 CTCAGGCAGAACAATTTATGAAAGAGCGCATTAATAAACGGCATATGCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    701 CTCAGGCAGAACAATTTATGAAAGAGCGCATTAATAAACGGCATATGCAA    750

BSNT_00087___    751 AATGGCGTGACGTTGATCGACCCGATGAATACGTATATTTCTCCTGACGC    800
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU00500___gc    751 AATGGCGTGACGTTGATTGACCCGATGAATACGTATATTTCTCCTGACGC    800

BSNT_00087___    801 TGTTATCGGAAGCGATACTGTGATTTACCCTGGAACTGTGATTAAAGGTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    801 TGTTATCGGAAGCGATACTGTGATTTACCCTGGAACTGTGATTAAAGGTG    850

BSNT_00087___    851 AGGTGCAAATCGGAGAAGATACGATTATTGGCCCTCATACGGAGATTATG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    851 AGGTGCAAATCGGAGAAGATACGATTATTGGCCCTCATACGGAGATTATG    900

BSNT_00087___    901 AATAGTGCCATTGGCAGCCGTACGGTTATTAAACAATCGGTAGTCAATCA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    901 AATAGTGCCATTGGCAGCCGTACGGTTATTAAACAATCGGTAGTCAATCA    950

BSNT_00087___    951 CAGTAAAGTGGGGAATGATGTAAACATAGGACCTTTTGCTCACATCAGAC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    951 CAGTAAAGTGGGGAATGATGTAAACATAGGACCTTTTGCTCACATCAGAC   1000

BSNT_00087___   1001 CTGATTCTGTCATCGGGAATGAAGTGAAGATCGGGAATTTTGTAGAAATT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc   1001 CTGATTCTGTCATCGGGAATGAAGTGAAGATCGGGAATTTTGTAGAAATT   1050

BSNT_00087___   1051 AAAAAGACTCAATTCGGAGACCGAAGCAAGGCATCTCATCTAAGCTATGT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc   1051 AAAAAGACTCAATTCGGAGACCGAAGCAAGGCATCTCATCTAAGCTATGT   1100

BSNT_00087___   1101 CGGCGATGCTGAGGTAGGCACTGATGTAAACCTGGGCTGCGGTTCAATTA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc   1101 CGGCGATGCTGAGGTAGGCACTGATGTAAACCTGGGCTGCGGTTCAATTA   1150

BSNT_00087___   1151 CTGTCAATTATGATGGAAAGAATAAGTATTTGACAAAAATTGAAGATGGC   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc   1151 CTGTCAATTATGATGGAAAGAATAAGTATTTGACAAAAATTGAAGATGGC   1200

BSNT_00087___   1201 GCGTTTATCGGCTGTAATTCCAACTTGGTTGCCCCTGTCACAGTCGGAGA   1250
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU00500___gc   1201 GCGTTTATCGGCTGCAATTCCAACTTGGTTGCCCCTGTCACAGTCGGAGA   1250

BSNT_00087___   1251 AGGCGCTTATGTGGCGGCAGGTTCAACTGTTACGGAAGATGTACCTGGAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc   1251 AGGCGCTTATGTGGCGGCAGGTTCAACTGTTACGGAAGATGTACCTGGAA   1300

BSNT_00087___   1301 AAGCACTTGCTATTGCCAGAGCGAGACAAGTAAATAAAGACGATTATGTG   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc   1301 AAGCACTTGCTATTGCCAGAGCGAGACAAGTAAATAAAGACGATTATGTG   1350

BSNT_00087___   1351 AAAAATATTCATAAAAAATAA   1371
                     |||||||||||||||||||||
BSU00500___gc   1351 AAAAATATTCATAAAAAATAA   1371


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