Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00116 and BSU00650

See Amino acid alignment / Visit BSNT_00116 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:01
# Commandline: needle
#    -asequence dna-align/BSNT_00116___yabS.1.22522.seq
#    -bsequence dna-align/BSU00650___yabS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00116___yabS-BSU00650___yabS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00116___yabS-BSU00650___yabS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00116___yabS
# 2: BSU00650___yabS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 738
# Identity:     731/738 (99.1%)
# Similarity:   731/738 (99.1%)
# Gaps:           0/738 ( 0.0%)
# Score: 3627.0
# 
#
#=======================================

BSNT_00116___      1 GTGAACAACGGACATTTAAATCAAATTTTGCTGATAACGGATGGCTGCTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya      1 GTGAACAACGGACATTTAAATCAAATTTTGCTGATAACGGATGGCTGCTC     50

BSNT_00116___     51 AAACCATGGGGAAGACCCGCTTGCAATGGCTGCTTTTGCTAAAGAGCAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya     51 AAACCATGGGGAAGACCCGCTTGCAATGGCTGCTTTTGCTAAAGAGCAGG    100

BSNT_00116___    101 GGATTACGGTAAATGTTATTGGTATAATGGAAGAAAATCAAATTGACCCT    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00650___ya    101 GGATTACGGTAAATGTCATTGGTATAATGGAAGAAAATCAAATTGACCCT    150

BSNT_00116___    151 GAGGCAATGAAGGAAGTCGAAGGGATTGCACTTGCCGGAGGAGGCGTGCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    151 GAGGCAATGAAGGAAGTCGAAGGGATTGCACTTGCCGGAGGAGGCGTGCA    200

BSNT_00116___    201 CCAAGTCGTTTATGCATCTCAGCTTTCACAAACTGTTCAAATGGTAACAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    201 CCAAGTCGTTTATGCATCTCAGCTTTCACAAACTGTTCAAATGGTAACAA    250

BSNT_00116___    251 AAAAAGCGATGACGCAAACCTTACAAGGTGTAGTCAATCAAGAACTGAAA    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    251 AGAAAGCGATGACGCAAACCTTACAAGGTGTAGTCAATCAAGAACTGAAA    300

BSNT_00116___    301 CAGATTCTCGGAAAGAATGTGGAAATGGAAGAGCTTTCCCCGGAAAAACG    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU00650___ya    301 CAGATTCTCGGAAAGAATGTGGAAATGGAAGAGCTTTCTCCGGAAAAACG    350

BSNT_00116___    351 CGGCGAAGTCATGGAAGTGGTAGACGAGCTTGGAGAAACGGTGCATCTTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    351 CGGCGAAGTCATGGAAGTGGTAGACGAGCTTGGAGAAACGGTGCATCTTC    400

BSNT_00116___    401 AGGTTTTGGTTCTTGTTGATACAAGTGCAAGTATGGCGCCAAAGCTTCCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    401 AGGTTTTGGTTCTTGTTGATACAAGTGCAAGTATGGCGCCAAAGCTTCCA    450

BSNT_00116___    451 ACAGTAAAAGAGGCACTGATTGATTTGTCTGTAAGCCTCAATTCTCGAAT    500
                     ||||||||||||||.|||||||||||||||||||||||||||||.|||||
BSU00650___ya    451 ACAGTAAAAGAGGCGCTGATTGATTTGTCTGTAAGCCTCAATTCCCGAAT    500

BSNT_00116___    501 CGGGAATAACGAATTTGCGATGTGTATATTTCCCGGGAAAAAACAAGAGG    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    501 TGGGAATAACGAATTTGCGATGTGTATATTTCCCGGGAAAAAACAAGAGG    550

BSNT_00116___    551 TCGAGCTTGTGCTGAACTGGACACCGAAGCTGCAATCTCTTTCCACACTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    551 TCGAGCTTGTGCTGAACTGGACACCGAAGCTGCAATCTCTTTCCACACTC    600

BSNT_00116___    601 TTTGCAAAGCTTTCGACAGGCGGCATCACGCCGACAGGTCCGGCAATTCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU00650___ya    601 TTTGCAAAGCTTTCGACAGGCGGCATCACGCCGACAGGTCCGGCGATTCG    650

BSNT_00116___    651 TGAAGCGACACTGCAGTTTGAAAAAATACGCTCAAGAAGGGGCATGCTGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00650___ya    651 TGAAGCGACACTGCAGTTTGAAAAAATACGCTCAAGAAGGGGCATGCTGG    700

BSNT_00116___    701 CAGATGATGAACGACGCTTTGACGAGTTTGGCATGTAG    738
                     ||||||||||||||||||||||||||||||||||||||
BSU00650___ya    701 CAGATGATGAACGACGCTTTGACGAGTTTGGCATGTAG    738


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.