Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00121 and BSU00690

See Amino acid alignment / Visit BSNT_00121 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:02
# Commandline: needle
#    -asequence dna-align/BSNT_00121___ftsH.1.22522.seq
#    -bsequence dna-align/BSU00690___ftsH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00121___ftsH-BSU00690___ftsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00121___ftsH-BSU00690___ftsH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00121___ftsH
# 2: BSU00690___ftsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1914
# Identity:    1898/1914 (99.2%)
# Similarity:  1898/1914 (99.2%)
# Gaps:           0/1914 ( 0.0%)
# Score: 9426.0
# 
#
#=======================================

BSNT_00121___      1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft      1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT     50

BSNT_00121___     51 AGTAATCGGGGTTGTGAGCTACTTCCAGACCTCAAATCCGAAAACAGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft     51 AGTAATCGGGGTTGTGAGCTACTTCCAGACCTCAAATCCGAAAACAGAAA    100

BSNT_00121___    101 ATATGTCGTACAGTACGTTCATCAAAAACCTGGATGACGGGAAAGTTGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    101 ATATGTCGTACAGTACGTTCATCAAAAACCTGGATGACGGGAAAGTTGAT    150

BSNT_00121___    151 AGCGTATCGGTTCAGCCTGTCAGAGGTGTTTATGAGGTAAAAGGGCAGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    151 AGCGTATCGGTTCAGCCTGTCAGAGGTGTTTATGAGGTAAAAGGGCAGCT    200

BSNT_00121___    201 GAAAAACTACGACAAAGATCAATACTTTTTGACTCATGTTCCTGAAGGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    201 GAAAAACTACGACAAAGATCAATACTTTTTGACTCATGTTCCTGAAGGAA    250

BSNT_00121___    251 AGGGAGCAGACCAGATATTTAACGCTTTGAAAAAGACAGACGTAAAGGTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    251 AGGGAGCAGACCAGATATTTAACGCTTTGAAAAAGACAGACGTAAAGGTT    300

BSNT_00121___    301 GAGCCCGCTCAAGAAACAAGCGGATGGGTGACGTTCCTGACGACCATCAT    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    301 GAGCCCGCGCAAGAAACAAGCGGATGGGTGACGTTCCTGACGACCATCAT    350

BSNT_00121___    351 CCCATTTGTCATTATCTTTATTCTGTTTTTCTTCCTGCTCAATCAGGCTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    351 CCCATTTGTCATTATCTTTATTCTGTTTTTCTTCCTGCTCAATCAGGCTC    400

BSNT_00121___    401 AAGGTGGCGGCAGCCGTGTCATGAACTTTGGCAAGAGTAAAGCGAAGCTG    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    401 AAGGCGGCGGCAGCCGTGTCATGAACTTTGGCAAGAGTAAAGCGAAGCTG    450

BSNT_00121___    451 TATACAGAGGAAAAGAAACGCGTCAAATTTAAAGACGTTGCAGGGGCTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    451 TATACAGAGGAAAAGAAACGCGTCAAATTTAAAGACGTTGCAGGGGCTGA    500

BSNT_00121___    501 CGAAGAAAAGCAAGAACTTGTTGAAGTTGTTGAGTTTCTGAAAGATCCCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    501 CGAAGAAAAGCAAGAACTTGTTGAAGTTGTTGAGTTTCTGAAAGATCCCC    550

BSNT_00121___    551 GCAAGTTTGCCGAGCTTGGCGCCAGAATACCGAAAGGCGTGCTTTTAGTC    600
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00690___ft    551 GCAAGTTTGCCGAGCTCGGCGCCAGAATACCGAAAGGCGTGCTTTTAGTC    600

BSNT_00121___    601 GGACCTCCGGGTACCGGTAAAACATTGCTTGCCAAGGCTTGTGCAGGTGA    650
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU00690___ft    601 GGACCTCCGGGTACCGGTAAAACATTGCTTGCCAAGGCTTGTGCAGGAGA    650

BSNT_00121___    651 AGCCGGCGTACCTTTCTTCAGCATCAGCGGATCTGATTTCGTTGAAATGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    651 AGCCGGCGTACCTTTCTTCAGCATCAGCGGATCTGATTTCGTTGAAATGT    700

BSNT_00121___    701 TTGTAGGGGTCGGTGCTTCCCGTGTGCGTGACTTGTTTGAAAATGCAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU00690___ft    701 TTGTAGGGGTCGGTGCTTCCCGTGTGCGTGACTTGTTTGAAAATGCGAAA    750

BSNT_00121___    751 AAGAATGCGCCTTGTTTGATTTTCATTGATGAAATTGATGCAGTCGGACG    800
                     ||||||||||||||||||||.|||||||||||||||||.|||||||||||
BSU00690___ft    751 AAGAATGCGCCTTGTTTGATCTTCATTGATGAAATTGACGCAGTCGGACG    800

BSNT_00121___    801 CCAGCGTGGTGCTGGTCTCGGCGGTGGACACGATGAACGTGAACAGACGC    850
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    801 CCAGCGTGGCGCTGGTCTCGGCGGTGGACACGATGAACGTGAACAGACGC    850

BSNT_00121___    851 TAAACCAATTGCTTGTTGAAATGGACGGATTCAGCGCTAATGAAGGAATT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    851 TAAACCAATTGCTTGTTGAAATGGACGGATTCAGCGCTAATGAAGGAATT    900

BSNT_00121___    901 ATCATCATTGCTGCGACGAACCGTGCGGACATCTTGGACCCAGCCTTACT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    901 ATCATCATTGCTGCGACGAACCGTGCGGACATCTTGGACCCAGCCTTACT    950

BSNT_00121___    951 TCGTCCGGGACGTTTTGACCGTCAAATCACAGTGGACCGCCCAGATGTCA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft    951 TCGTCCGGGACGTTTTGACCGTCAAATCACAGTGGACCGCCCAGATGTCA   1000

BSNT_00121___   1001 TTGGCCGTGAAGCTGTATTGAAAGTCCATGCGAGAAACAAACCGCTGGAT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1001 TTGGCCGTGAAGCTGTATTGAAAGTCCATGCGAGAAACAAACCGCTGGAT   1050

BSNT_00121___   1051 GAAACGGTTAACCTAAAATCAATTGCCATGAGAACACCAGGCTTCTCAGG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1051 GAAACGGTTAACCTAAAATCAATTGCCATGAGAACACCAGGCTTCTCAGG   1100

BSNT_00121___   1101 CGCTGACTTAGAAAATCTCTTGAATGAAGCTGCGCTTGTAGCAGCTCGTC   1150
                     |||||||||||||||.||||||||||||||||||||||||||.|||||||
BSU00690___ft   1101 CGCTGACTTAGAAAACCTCTTGAATGAAGCTGCGCTTGTAGCGGCTCGTC   1150

BSNT_00121___   1151 AAAACAAGAAAAAAATCGATGCGCGTGATATTGACGAAGCGACGGACCGT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1151 AAAACAAGAAAAAAATCGATGCGCGTGATATTGACGAAGCGACGGACCGT   1200

BSNT_00121___   1201 GTAATTGCCGGACCTGCTAAGAAGAGCCGCGTTATCTCCAAGAAAGAACG   1250
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU00690___ft   1201 GTAATTGCCGGACCCGCTAAGAAGAGCCGCGTTATCTCCAAGAAAGAACG   1250

BSNT_00121___   1251 CAATATCGTGGCTTATCACGAAGGCGGACACACCGTTATCGGACTCGTTT   1300
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU00690___ft   1251 CAATATCGTGGCTTATCACGAAGGCGGACACACCGTTATCGGTCTCGTTT   1300

BSNT_00121___   1301 TAGATGAGGCAGATATGGTTCATAAAGTAACGATTGTTCCTCGGGGCCAG   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1301 TAGATGAGGCAGATATGGTTCATAAAGTAACGATTGTTCCTCGGGGCCAG   1350

BSNT_00121___   1351 GCTGGCGGTTATGCTGTTATGCTGCCAAGAGAAGACCGTTATTTCCAAAC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1351 GCTGGCGGTTATGCTGTTATGCTGCCAAGAGAAGACCGTTATTTCCAAAC   1400

BSNT_00121___   1401 AAAGCCGGAACTGCTTGATAAAATTGTCGGCCTCTTGGGCGGACGTGTTG   1450
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1401 AAAGCCGGAGCTGCTTGATAAAATTGTCGGCCTCTTGGGCGGACGTGTTG   1450

BSNT_00121___   1451 CTGAAGAGATTATCTTCGGTGAAGTCAGCACAGGGGCGCACAATGACTTC   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1451 CTGAAGAGATTATCTTCGGTGAAGTCAGCACAGGGGCGCACAATGACTTC   1500

BSNT_00121___   1501 CAGCGTGCGACGAATATTGCAAGACGAATGGTTACGGAATTCGGTATGTC   1550
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU00690___ft   1501 CAGCGTGCGACGAATATTGCAAGACGAATGGTTACAGAATTCGGTATGTC   1550

BSNT_00121___   1551 AGAAAAACTGGGACCGTTGCAATTTGGACAGTCTCAGGGCGGTCAGGTAT   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1551 AGAAAAACTGGGACCGTTGCAATTTGGACAGTCTCAGGGCGGTCAGGTAT   1600

BSNT_00121___   1601 TCTTAGGCCGTGATTTCAACAACGAACAGAACTACAGTGATCAAATCGCT   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1601 TCTTAGGCCGTGATTTCAACAACGAACAGAACTACAGTGATCAAATCGCT   1650

BSNT_00121___   1651 TACGAAATTGATCAGGAAATTCAGCGCATCATCAAAGAATGTTATGAGCG   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1651 TACGAAATTGATCAGGAAATTCAGCGCATCATCAAAGAATGTTATGAGCG   1700

BSNT_00121___   1701 TGCGAAACAAATCCTGACTGAAAATCGTGACAAGCTTGAATTGATTGCCC   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1701 TGCGAAACAAATCCTGACTGAAAATCGTGACAAGCTTGAATTGATTGCCC   1750

BSNT_00121___   1751 AAACGCTTCTGAAAGTTGAAACGCTTGACGCTGAACAGATCAAACACCTT   1800
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU00690___ft   1751 AAACGCTTCTGAAAGTTGAAACGCTTGACGCTGAACAAATCAAACACCTT   1800

BSNT_00121___   1801 ATCGATCATGGAACATTACCTGAGCGTAATTTCTCAGATGATGAAAAGAA   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1801 ATCGATCATGGAACATTACCTGAGCGTAATTTCTCAGATGATGAAAAGAA   1850

BSNT_00121___   1851 CGATGATGTGAAAGTAAACATTCTGACAAAAACAGAAGAAAAGAAAGACG   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00690___ft   1851 CGATGATGTGAAAGTAAACATTCTGACAAAAACAGAAGAAAAGAAAGACG   1900

BSNT_00121___   1901 ATACGAAGGAGTAA   1914
                     |||||||.||||||
BSU00690___ft   1901 ATACGAAAGAGTAA   1914


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