Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00205 and BSU01040
See
Amino acid alignment /
Visit
BSNT_00205 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:08
# Commandline: needle
# -asequence dna-align/BSNT_00205___rplJ.1.22522.seq
# -bsequence dna-align/BSU01040___rplJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00205___rplJ-BSU01040___rplJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00205___rplJ-BSU01040___rplJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00205___rplJ
# 2: BSU01040___rplJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity: 500/501 (99.8%)
# Similarity: 500/501 (99.8%)
# Gaps: 0/501 ( 0.0%)
# Score: 2496.0
#
#
#=======================================
BSNT_00205___ 1 ATGAGCAGCGCAATTGAAACAAAAAAAGTTGTTGTTGAAGAAATTGCTTC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 1 ATGAGCAGCGCAATTGAAACAAAAAAAGTTGTTGTTGAAGAAATTGCTTC 50
BSNT_00205___ 51 TAAACTGAAAGAAAGTAAATCAACGATCATCGTTGACTATCGCGGACTTA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 51 TAAACTGAAAGAAAGTAAATCAACGATCATCGTTGACTATCGCGGACTTA 100
BSNT_00205___ 101 ACGTTTCTGAAGTAACTGAACTTCGTAAACAGCTTCGCGAAGCTAACGTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 101 ACGTTTCTGAAGTAACTGAACTTCGTAAACAGCTTCGCGAAGCTAACGTT 150
BSNT_00205___ 151 GAGTTCAAAGTTTACAAAAATACGATGACTCGCCGTGCGGTTGAACAAGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 151 GAGTTCAAAGTTTACAAAAATACGATGACTCGCCGTGCGGTTGAACAAGC 200
BSNT_00205___ 201 TGAGCTTAATGGTTTGAATGATTTCTTAACTGGACCGAACGCGATCGCAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 201 TGAGCTTAATGGTTTGAATGATTTCTTAACTGGACCGAACGCGATCGCAT 250
BSNT_00205___ 251 TCAGCACTGAAGATGTTGTCGCTCCGGCTAAAGTTCTTAATGACTTCGCT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 251 TCAGCACTGAAGATGTTGTCGCTCCGGCTAAAGTTCTTAATGACTTCGCT 300
BSNT_00205___ 301 AAAAATCACGAAGCTCTTGAAATCAAAGCTGGCGTTATCGAAGGTAAAGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 301 AAAAATCACGAAGCTCTTGAAATCAAAGCTGGCGTTATCGAAGGTAAAGT 350
BSNT_00205___ 351 TTCTACTGTTGAAGAAGTGAAAGCTCTTGCTGAACTTCCATCACGCGAAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 351 TTCTACTGTTGAAGAAGTGAAAGCTCTTGCTGAACTTCCATCACGCGAAG 400
BSNT_00205___ 401 GCTTGCTTTCTATGTTGCTTAGCGTACTTCAAGCTCCAGTTCGCAACCTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 401 GCTTGCTTTCTATGTTGCTTAGCGTACTTCAAGCTCCAGTTCGCAACCTT 450
BSNT_00205___ 451 GCTTTTGCTGCAAAAGCTGTGGCAGAACAAAAGGAAGAACAAGGCGCTTA 500
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU01040___rp 451 GCTCTTGCTGCAAAAGCTGTGGCAGAACAAAAGGAAGAACAAGGCGCTTA 500
BSNT_00205___ 501 A 501
|
BSU01040___rp 501 A 501
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.