Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00220 and BSU01160

See Amino acid alignment / Visit BSNT_00220 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:13
# Commandline: needle
#    -asequence dna-align/BSNT_00220___rplC.1.22522.seq
#    -bsequence dna-align/BSU01160___rplC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00220___rplC-BSU01160___rplC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00220___rplC-BSU01160___rplC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00220___rplC
# 2: BSU01160___rplC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity:     628/630 (99.7%)
# Similarity:   628/630 (99.7%)
# Gaps:           0/630 ( 0.0%)
# Score: 3132.0
# 
#
#=======================================

BSNT_00220___      1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTATTCGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp      1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTATTCGC     50

BSNT_00220___     51 TGAGAATGGTGATCTTATTCCGGTAACTGTTATCGAGGCTGCTCCAAACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp     51 TGAGAATGGTGATCTTATTCCGGTAACTGTTATCGAGGCTGCTCCAAACG    100

BSNT_00220___    101 TTGTTCTTCAAAAGAAAACAGCTGAAAACGACGGTTACGAAGCAATCCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    101 TTGTTCTTCAAAAGAAAACAGCTGAAAACGACGGTTACGAAGCAATCCAG    150

BSNT_00220___    151 CTTGGTTTTGACGACAAGCGTGAAAAGCTTTCTAACAAACCTGAAAAAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    151 CTTGGTTTTGACGACAAGCGTGAAAAGCTTTCTAACAAACCTGAAAAAGG    200

BSNT_00220___    201 GCACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAAGAATTAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    201 GCACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAAGAATTAC    250

BSNT_00220___    251 GCGGAGTGGAAATGGATGCGTATGAAGTTGGTCAGGAAGTCAAGGTTGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    251 GCGGAGTGGAAATGGATGCGTATGAAGTTGGTCAGGAAGTCAAGGTTGAA    300

BSNT_00220___    301 ATTTTCTCTGCTGGAGAAATCGTAGATGTAACAGGAGTATCTAAAGGTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    301 ATTTTCTCTGCTGGAGAAATCGTAGATGTAACAGGAGTATCTAAAGGTAA    350

BSNT_00220___    351 AGGTTTCCAAGGTGCGATCAAGCGCCACGGACAATCTCGCGGACCTATGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    351 AGGTTTCCAAGGTGCGATCAAGCGCCACGGACAATCTCGCGGACCTATGT    400

BSNT_00220___    401 CTCACGGTTCACGCTACCACCGTCGTCCTGGTTCAATGGGACCTGTAGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    401 CTCACGGTTCACGCTACCACCGTCGTCCTGGTTCAATGGGACCTGTAGAT    450

BSNT_00220___    451 CCTAACCGTGTATTCAAAGGTAAATTATTACCTGGACGTATGGGCGGAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    451 CCTAACCGTGTATTCAAAGGTAAATTATTACCTGGACGTATGGGCGGAGA    500

BSNT_00220___    501 GCAAATCACTGTTCAAAATCTTGAAATCGTTAAAGTTGATGCAGAACGCA    550
                     ||||||||||||||||||.|||||||||||.|||||||||||||||||||
BSU01160___rp    501 GCAAATCACTGTTCAAAACCTTGAAATCGTAAAAGTTGATGCAGAACGCA    550

BSNT_00220___    551 ATCTTCTTTTGATCAAAGGTAACGTACCTGGTGCGAAGAAATCTTTAATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01160___rp    551 ATCTTCTTTTGATCAAAGGTAACGTACCTGGTGCGAAGAAATCTTTAATC    600

BSNT_00220___    601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA    630
                     ||||||||||||||||||||||||||||||
BSU01160___rp    601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA    630


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