Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00221 and BSU01170

See Amino acid alignment / Visit BSNT_00221 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:13
# Commandline: needle
#    -asequence dna-align/BSNT_00221___rplD.1.22522.seq
#    -bsequence dna-align/BSU01170___rplD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00221___rplD-BSU01170___rplD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00221___rplD-BSU01170___rplD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00221___rplD
# 2: BSU01170___rplD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 624
# Identity:     621/624 (99.5%)
# Similarity:   621/624 (99.5%)
# Gaps:           0/624 ( 0.0%)
# Score: 3093.0
# 
#
#=======================================

BSNT_00221___      1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGACAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp      1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGACAT     50

BSNT_00221___     51 CGAATTAAACGCTTCTGTATTTGGTATCGAACCAAATGAGAGTGTTGTAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp     51 CGAATTAAACGCTTCTGTATTTGGTATCGAACCAAATGAGAGTGTTGTAT    100

BSNT_00221___    101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGAACTCACAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp    101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGAACTCACAAA    150

BSNT_00221___    151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGTAAACCATGGCGTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp    151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGTAAACCATGGCGTCA    200

BSNT_00221___    201 AAAAGGTACTGGACGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp    201 AAAAGGTACTGGACGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC    250

BSNT_00221___    251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTATAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp    251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTATAAA    300

BSNT_00221___    301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp    301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA    350

BSNT_00221___    351 AGTGATCGACAACAATATCATCGTTCTTGAAGATCTTACTCTTGATACGG    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU01170___rp    351 AGTGATCGACAACAACATCATCGTTCTTGAAGATCTTACTCTTGATACGG    400

BSNT_00221___    401 CTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGGTTATCTGTTGAGAAA    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU01170___rp    401 CTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGATTATCTGTTGAGAAA    450

BSNT_00221___    451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTAGCATTATCTGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp    451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTAGCATTATCTGC    500

BSNT_00221___    501 TCGTAACATTCCTGGAGTTACTGTTGTTGAAGCTAATGGAATCAACGTTT    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU01170___rp    501 TCGTAACATTCCTGGAGTTACTGTTGTTGAAGCTAACGGAATCAACGTTT    550

BSNT_00221___    551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCAGCGGTTGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01170___rp    551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCAGCGGTTGAA    600

BSNT_00221___    601 AAAGTAGAGGAGGTGCTTGCATAA    624
                     ||||||||||||||||||||||||
BSU01170___rp    601 AAAGTAGAGGAGGTGCTTGCATAA    624


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