Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00229 and BSU01250

See Amino acid alignment / Visit BSNT_00229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:14
# Commandline: needle
#    -asequence dna-align/BSNT_00229___rpsQ.1.22522.seq
#    -bsequence dna-align/BSU01250___rpsQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00229___rpsQ-BSU01250___rpsQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00229___rpsQ-BSU01250___rpsQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00229___rpsQ
# 2: BSU01250___rpsQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     264/264 (100.0%)
# Similarity:   264/264 (100.0%)
# Gaps:           0/264 ( 0.0%)
# Score: 1320.0
# 
#
#=======================================

BSNT_00229___      1 ATGAGCGAACGTAACCAACGCAAAGTTTACCAAGGCCGTGTTGTTTCTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01250___rp      1 ATGAGCGAACGTAACCAACGCAAAGTTTACCAAGGCCGTGTTGTTTCTGA     50

BSNT_00229___     51 CAAAATGGATAAAACCATTACTGTTGTTGTTGAGACATACAAAAAACATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01250___rp     51 CAAAATGGATAAAACCATTACTGTTGTTGTTGAGACATACAAAAAACATA    100

BSNT_00229___    101 CACTTTACGGTAAACGCGTAAAATACTCAAAAAAATTCAAAGCACATGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01250___rp    101 CACTTTACGGTAAACGCGTAAAATACTCAAAAAAATTCAAAGCACATGAT    150

BSNT_00229___    151 GAAAATAATCAAGCTAAAATCGGTGACATCGTTAAGATCATGGAAACTCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01250___rp    151 GAAAATAATCAAGCTAAAATCGGTGACATCGTTAAGATCATGGAAACTCG    200

BSNT_00229___    201 TCCATTGTCTGCAACTAAGCGTTTCCGTCTAGTTGAAGTTGTCGAAGAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01250___rp    201 TCCATTGTCTGCAACTAAGCGTTTCCGTCTAGTTGAAGTTGTCGAAGAAG    250

BSNT_00229___    251 CTGTTATTATCTAA    264
                     ||||||||||||||
BSU01250___rp    251 CTGTTATTATCTAA    264


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.