Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00231 and BSU01270

See Amino acid alignment / Visit BSNT_00231 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:14
# Commandline: needle
#    -asequence dna-align/BSNT_00231___rplX.1.22522.seq
#    -bsequence dna-align/BSU01270___rplX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00231___rplX-BSU01270___rplX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00231___rplX-BSU01270___rplX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00231___rplX
# 2: BSU01270___rplX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     312/312 (100.0%)
# Similarity:   312/312 (100.0%)
# Gaps:           0/312 ( 0.0%)
# Score: 1560.0
# 
#
#=======================================

BSNT_00231___      1 ATGCATGTAAAAAAAGGCGATAAAGTTATGGTTATCTCTGGTAAAGATAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01270___rp      1 ATGCATGTAAAAAAAGGCGATAAAGTTATGGTTATCTCTGGTAAAGATAA     50

BSNT_00231___     51 AGGCAAACAAGGAACAATCCTTGCTGCTTTCCCTAAAAAGGACCGCGTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01270___rp     51 AGGCAAACAAGGAACAATCCTTGCTGCTTTCCCTAAAAAGGACCGCGTTT    100

BSNT_00231___    101 TAGTTGAAGGTGTTAACATGGTAAAGAAACACTCTAAACCAACTCAAGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01270___rp    101 TAGTTGAAGGTGTTAACATGGTAAAGAAACACTCTAAACCAACTCAAGCT    150

BSNT_00231___    151 AACCCTCAAGGCGGTATTTCTAATCAAGAGGCGCCAATTCATGTATCAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01270___rp    151 AACCCTCAAGGCGGTATTTCTAATCAAGAGGCGCCAATTCATGTATCAAA    200

BSNT_00231___    201 CGTTATGCCGCTCGATCCTAAAACAGGTGAAGTGACTCGCGTAGGATACA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01270___rp    201 CGTTATGCCGCTCGATCCTAAAACAGGTGAAGTGACTCGCGTAGGATACA    250

BSNT_00231___    251 AAGTGGAAGATGGCAAAAAAGTTCGTGTAGCAAAAAAATCTGGGCAAGTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01270___rp    251 AAGTGGAAGATGGCAAAAAAGTTCGTGTAGCAAAAAAATCTGGGCAAGTT    300

BSNT_00231___    301 CTAGATAAATAG    312
                     ||||||||||||
BSU01270___rp    301 CTAGATAAATAG    312


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