Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00238 and BSU01340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:15
# Commandline: needle
# -asequence dna-align/BSNT_00238___rpmD.1.22522.seq
# -bsequence dna-align/BSU01340___rpmD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00238___rpmD-BSU01340___rpmD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00238___rpmD-BSU01340___rpmD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00238___rpmD
# 2: BSU01340___rpmD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 180/180 (100.0%)
# Similarity: 180/180 (100.0%)
# Gaps: 0/180 ( 0.0%)
# Score: 900.0
#
#
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BSNT_00238___ 1 ATGGCTAAATTAGAAATTACCCTCAAACGAAGTGTAATCGGTCGCCCGGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01340___rp 1 ATGGCTAAATTAGAAATTACCCTCAAACGAAGTGTAATCGGTCGCCCGGA 50
BSNT_00238___ 51 AGACCAACGCGTTACTGTAAGAACACTTGGTTTAAAGAAAACAAACCAAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01340___rp 51 AGACCAACGCGTTACTGTAAGAACACTTGGTTTAAAGAAAACAAACCAAA 100
BSNT_00238___ 101 CTGTTGTTCATGAAGACAACGCTGCGATCCGTGGTATGATTAATAAAGTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01340___rp 101 CTGTTGTTCATGAAGACAACGCTGCGATCCGTGGTATGATTAATAAAGTA 150
BSNT_00238___ 151 TCTCATTTAGTTTCTGTTAAAGAACAATAA 180
||||||||||||||||||||||||||||||
BSU01340___rp 151 TCTCATTTAGTTTCTGTTAAAGAACAATAA 180
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