Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00247 and BSU01420

See Amino acid alignment / Visit BSNT_00247 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:16
# Commandline: needle
#    -asequence dna-align/BSNT_00247___rpsK.1.22522.seq
#    -bsequence dna-align/BSU01420___rpsK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00247___rpsK-BSU01420___rpsK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00247___rpsK-BSU01420___rpsK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00247___rpsK
# 2: BSU01420___rpsK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity:     396/396 (100.0%)
# Similarity:   396/396 (100.0%)
# Gaps:           0/396 ( 0.0%)
# Score: 1980.0
# 
#
#=======================================

BSNT_00247___      1 ATGGCTGCTGCTCGTAAATCTAACACGCGTAAACGTCGCGTGAAAAAGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp      1 ATGGCTGCTGCTCGTAAATCTAACACGCGTAAACGTCGCGTGAAAAAGAA     50

BSNT_00247___     51 TATTGAGTCTGGAATTGCTCATATTCGTTCAACTTTCAATAACACGATCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp     51 TATTGAGTCTGGAATTGCTCATATTCGTTCAACTTTCAATAACACGATCG    100

BSNT_00247___    101 TTACGATCACTGACACTCATGGTAATGCTATTTCTTGGTCTAGTGCCGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp    101 TTACGATCACTGACACTCATGGTAATGCTATTTCTTGGTCTAGTGCCGGA    150

BSNT_00247___    151 GCTTTAGGATTCAGAGGTTCTCGTAAATCTACTCCTTTTGCTGCGCAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp    151 GCTTTAGGATTCAGAGGTTCTCGTAAATCTACTCCTTTTGCTGCGCAAAT    200

BSNT_00247___    201 GGCTGCAGAAACAGCTGCTAAAGGTTCAATCGAACATGGTCTTAAAACTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp    201 GGCTGCAGAAACAGCTGCTAAAGGTTCAATCGAACATGGTCTTAAAACTC    250

BSNT_00247___    251 TAGAGGTTACTGTTAAAGGACCTGGTTCAGGCCGTGAAGCTGCAATCCGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp    251 TAGAGGTTACTGTTAAAGGACCTGGTTCAGGCCGTGAAGCTGCAATCCGT    300

BSNT_00247___    301 GCACTTCAAGCTGCTGGACTAGAAGTCACTGCTATCAGAGACGTAACTCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp    301 GCACTTCAAGCTGCTGGACTAGAAGTCACTGCTATCAGAGACGTAACTCC    350

BSNT_00247___    351 TGTTCCTCATAACGGATGCCGTCCACCAAAACGTCGCCGCGTGTAA    396
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU01420___rp    351 TGTTCCTCATAACGGATGCCGTCCACCAAAACGTCGCCGCGTGTAA    396


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