Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00264 and BSU01550

See Amino acid alignment / Visit BSNT_00264 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:17
# Commandline: needle
#    -asequence dna-align/BSNT_00264___gerD.1.22522.seq
#    -bsequence dna-align/BSU01550___gerD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00264___gerD-BSU01550___gerD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00264___gerD-BSU01550___gerD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00264___gerD
# 2: BSU01550___gerD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     557/558 (99.8%)
# Similarity:   557/558 (99.8%)
# Gaps:           0/558 ( 0.0%)
# Score: 2781.0
# 
#
#=======================================

BSNT_00264___      1 ATGTCAAAAGCCAAAACGCTATTGATGAGCTGTTTTTTGTTATTATCTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge      1 ATGTCAAAAGCCAAAACGCTATTGATGAGCTGTTTTTTGTTATTATCTGT     50

BSNT_00264___     51 AACAGCTTGCGCTCCAAAAGACCAAGCAGCGGATATGGACTATGATCAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge     51 AACAGCTTGCGCTCCAAAAGACCAAGCAGCGGATATGGACTATGATCAGA    100

BSNT_00264___    101 CCAAAAAAATGGTTGTTGATATATTAAAAACTGATGATGGAAAGAAAGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    101 CCAAAAAAATGGTTGTTGATATATTAAAAACTGATGATGGAAAGAAAGCT    150

BSNT_00264___    151 ATTAAGGAATTATTAAATGATGATGCCATGAATGAAGCGCTGGTGATTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    151 ATTAAGGAATTATTAAATGATGATGCCATGAATGAAGCGCTGGTGATTGA    200

BSNT_00264___    201 CCAAGATGCAATTAAAGGAACAATAGAAAAAACACTCACATCTAAAAAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    201 CCAAGATGCAATTAAAGGAACAATAGAAAAAACACTCACATCTAAAAAAG    250

BSNT_00264___    251 GTGAAGAATTTTGGAAAAACATCTTTGAAGACACTGATTTTGCTGAGGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    251 GTGAAGAATTTTGGAAAAACATCTTTGAAGACACTGATTTTGCTGAGGGC    300

BSNT_00264___    301 TTTGCCAAAACTCTTCAGACAGAGCATGAAAAAGTGATTAAAAAGCTGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    301 TTTGCCAAAACTCTTCAGACAGAGCATGAAAAAGTGATTAAAAAGCTGAT    350

BSNT_00264___    351 GAAGGATCCAGATTACCAGAAGATGCTGATGAGCGTTATGCAGGATCCCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    351 GAAGGATCCAGATTACCAGAAGATGCTGATGAGCGTTATGCAGGATCCCG    400

BSNT_00264___    401 GCATGGATAAAAAGTACAGCCAGCTGGCAAAAAGCCAAGAATTCCGCAGT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    401 GCATGGATAAAAAGTACAGCCAGCTGGCAAAAAGCCAAGAATTCCGCAGT    450

BSNT_00264___    451 TATTTAGAAGAGGTTATTAACGAAACACTTTCTAGTCCGCTTTACAAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01550___ge    451 TATTTAGAAGAGGTTATTAACGAAACACTTTCTAGTCCGCTTTACAAAAA    500

BSNT_00264___    501 GCAGTTCGAAGATGAGCTGAAAAAAGCAGCAAAAGACACAGCCAAAGAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU01550___ge    501 GCAGTTCGAAGATGAGCTGAAAAAAGCAGCAAAAGACACAGCAAAAGAAA    550

BSNT_00264___    551 GTGAATAA    558
                     ||||||||
BSU01550___ge    551 GTGAATAA    558


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