Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00313 and BSU01640

See Amino acid alignment / Visit BSNT_00313 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:19
# Commandline: needle
#    -asequence dna-align/BSNT_00313___ybbB.1.22522.seq
#    -bsequence dna-align/BSU01640___ybbB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00313___ybbB-BSU01640___ybbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00313___ybbB-BSU01640___ybbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00313___ybbB
# 2: BSU01640___ybbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1590
# Identity:    1566/1590 (98.5%)
# Similarity:  1566/1590 (98.5%)
# Gaps:           0/1590 ( 0.0%)
# Score: 7734.0
# 
#
#=======================================

BSNT_00313___      1 GTGCAAAATGCAGTGATTTATCAACCGGTACAAATTGAATATCTAAAAAA     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU01640___yb      1 GTGCAAAATGCAGTGATTTATCAACCAGTACAAATTGAATATCTAAAAAA     50

BSNT_00313___     51 GACAAGTGATCTCTTCTCAGAACAGCAATTAGCCGATTCATTCGTGCTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb     51 GACAAGTGATCTCTTCTCAGAACAGCAATTAGCCGATTCATTCGTGCTGA    100

BSNT_00313___    101 TTTTTCATTTAAAAGGAAACGGCTATATTTCGATCGGAACAAACACCAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    101 TTTTTCATTTAAAAGGAAACGGCTATATTTCGATCGGAACAAACACCAAT    150

BSNT_00313___    151 CCTTTGCAAAAAAAGACACTTTATGTTTGTCCGCCTAACGAGACCTTTGG    200
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    151 CCTCTGCAAAAAAAGACACTTTATGTTTGTCCGCCTAACGAGACCTTTGG    200

BSNT_00313___    201 CTTTACGCCAGCAGCCGATGGACATATAGATGCCTGTCTGATCAGGCTTC    250
                     |||||||||||||||||||||||||||||||||||||.|.||||||||||
BSU01640___yb    201 CTTTACGCCAGCAGCCGATGGACATATAGATGCCTGTATAATCAGGCTTC    250

BSNT_00313___    251 AAAGCTATATCAAGGAAGCCGGCCAAGATATTTTCACACCGTGCACAGAA    300
                     .||||||||||||||||.||||.|||||||||||||||||||||||||||
BSU01640___yb    251 TAAGCTATATCAAGGAAACCGGGCAAGATATTTTCACACCGTGCACAGAA    300

BSNT_00313___    301 TCGGAATTAGCCAAACTGAAGCTTATAAATGTTTCACATATCGAAAATCT    350
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU01640___yb    301 TCGGAATTAGCCAAACTGAAGCTTATGAATGTTTCACATATCGAAAATCT    350

BSNT_00313___    351 TGCCGTCCGGCTTCAAGAGCTTGCCGCACTATGGAATGAATCGTCTCAGC    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    351 TGCAGTCCGGCTTCAAGAGCTTGCCGCACTATGGAATGAATCGTCTCAGC    400

BSNT_00313___    401 TTTCTCAGCTAAAATGTGGGATTGAAGTACAAAGCCTGATTTATGACCTC    450
                     ||||||||||||||||||.|||||||||||||||||||||||||||.||.
BSU01640___yb    401 TTTCTCAGCTAAAATGTGTGATTGAAGTACAAAGCCTGATTTATGATCTT    450

BSNT_00313___    451 TTTACTGCCAGTTTATCTGATCAAACGGATACACATTCAGCAATCGAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    451 TTTACTGCCAGTTTATCTGATCAAACGGATACACATTCAGCAATCGAAAA    500

BSNT_00313___    501 AACAAAACACTATATCGAAACCCATGCCGATACAAAAATCACGCTTGCCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    501 AACAAAACACTATATCGAAACCCATGCCGATACAAAAATCACGCTTGCCC    550

BSNT_00313___    551 AGCTGTCGCAAATGGCAGGAATCAGTGCCAAACACTACAGTGAAAGCTTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    551 AGCTGTCGCAAATGGCAGGAATCAGTGCCAAACACTACAGTGAAAGCTTT    600

BSNT_00313___    601 AAAAAATGGACAGGACAGAGCGTAACAGAATTTATTACGAAAACACGAAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    601 AAAAAATGGACAGGACAGAGCGTAACAGAATTTATTACGAAAACACGAAT    650

BSNT_00313___    651 CACAAAGGCAAAACTGCTCATGGCAAAATCAAACTGCAAATTGAAAGAAA    700
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU01640___yb    651 CACAAAGGCAAAACGGCTCATGGCAAAATCAAACTGCAAATTGAAAGAAA    700

BSNT_00313___    701 TCGCACACCAAACCGGTTATCAAGATGAATTTTATTTCAGCAGAATCTTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    701 TCGCACACCAAACCGGTTATCAAGATGAATTTTATTTCAGCAGAATCTTT    750

BSNT_00313___    751 AAAAAATATACAGGCTGTTCACCTACAAGCTATATGAAAAAACGCCGAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    751 AAAAAATATACAGGCTGTTCACCTACAAGCTATATGAAAAAACGCCGAAA    800

BSNT_00313___    801 GAAAATCGCCGCATACGGAAGGGGCACAATGGGCCATCTCATCCCCCTTC    850
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU01640___yb    801 GAAAATCGCCGCATACGGAAGGGGCACAATGGGCCATCTCATCCCTCTTC    850

BSNT_00313___    851 ACCACATACCTTTTGCGGCCGCTCTGCATCCAAAATGGACGTCTTACTAC    900
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU01640___yb    851 ACCACATACCTTTTGCGGCCGCTCTGCATCCGAAATGGACGTCTTACTAC    900

BSNT_00313___    901 TATCAGCATTATTCGACAGATATACCCGTCCAGCTCAGTGCATACCGGTT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    901 TATCAGCATTATTCGACAGATATACCCGTCCAGCTCAGTGCATACCGGTT    950

BSNT_00313___    951 TAATGAAAAGTGGGAAGAAAACCTGTACACGTTATCACAGGCAGAACCAG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb    951 TAATGAAAAGTGGGAAGAAAACCTGTACACGTTATCACAGGCAGAACCAG   1000

BSNT_00313___   1001 ATGTGATTGTCAGCATGGATTCTATTTCTCCAGAAGAACAAGATCGCCTG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb   1001 ATGTGATTGTCAGCATGGATTCTATTTCTCCAGAAGAACAAGATCGCCTG   1050

BSNT_00313___   1051 AATCGCATCGCAGAAGTCATGTACCTTCCTTCAGAAGAAAGCTGGAGAAC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb   1051 AATCGCATCGCAGAAGTCATGTACCTTCCTTCAGAAGAAAGCTGGAGAAC   1100

BSNT_00313___   1101 CCACTTTCTGCAAACTGCCTCATTTTTAAAGGAGGAGTCCGAAGCAGAAA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb   1101 CCACTTTCTGCAAACTGCCTCATTTTTAAAGGAGGAGTCCGAAGCAGAAA   1150

BSNT_00313___   1151 AGTGGCTAGCGGATTATGACCAGCAGACAACAGCCGCCAAAAAAACACTT   1200
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU01640___yb   1151 AGTGGCTAGCGGATTATGACCAGCAGACAACGGCCGCCAAAAAAACACTT   1200

BSNT_00313___   1201 CAACACGTTCAAGGGCTGCGTTTTCTCTTTTTGAGGCTGCATAAGCAAAA   1250
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb   1201 CAGCACGTTCAAGGGCTGCGTTTTCTCTTTTTGAGGCTGCATAAGCAAAA   1250

BSNT_00313___   1251 CTTCTATCTGGCACATAACCGAAGTGTCCGCGAAGTTTTCTTTGGGGATT   1300
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU01640___yb   1251 CTTCTATCTGGCTCATAACCGAAGTGTCCGCGAAGTTTTCTTTGGGGATT   1300

BSNT_00313___   1301 TAGGACTCAGCTCGGCAACAACGGCTGACACACCTTCAGAACAAGCGATT   1350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb   1301 TAGGATTCAGCTCGGCAACAACGGCTGACACACCTTCAGAACAAGCGATT   1350

BSNT_00313___   1351 TCGTTAGAAAATATCGCAAATTACCAAGCTGACTGTATGATGCTTTTTCT   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb   1351 TCGTTAGAAAATATCGCAAATTACCAAGCTGACTGTATGATGCTTTTTCT   1400

BSNT_00313___   1401 TTTTAAAGAGCCGGAGACTATAGCTTACTACCAGCAATTACAGCAGACAG   1450
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU01640___yb   1401 TTTTAAAGAGCCGGAGACCATAGCTTACTACCAGCAATTACAGCAGACAG   1450

BSNT_00313___   1451 AAGCATGGCAAAACCTAAGCGCGGTACGGAATAAGCGTGTTTATCTTCTA   1500
                     ||||||||||||||||||||||||||||..||||.|||||||||||||||
BSU01640___yb   1451 AAGCATGGCAAAACCTAAGCGCGGTACGAGATAACCGTGTTTATCTTCTA   1500

BSNT_00313___   1501 TCCCTTGACCCGTGGAATGAATACTCAGCTTGCGGGCACGAACGCATCGT   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01640___yb   1501 TCCCTTGACCCGTGGAATGAATACTCAGCTTGCGGGCACGAACGCATCGT   1550

BSNT_00313___   1551 TCAGCAAACTGTTTCTTTATTATCCGGAGATTGTCCATGA   1590
                     |||||||||||||||||||.||||||||||||||||||||
BSU01640___yb   1551 TCAGCAAACTGTTTCTTTACTATCCGGAGATTGTCCATGA   1590


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