Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00345 and BSU01760

See Amino acid alignment / Visit BSNT_00345 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:22
# Commandline: needle
#    -asequence dna-align/BSNT_00345___ybbR.1.22522.seq
#    -bsequence dna-align/BSU01760___ybbR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00345___ybbR-BSU01760___ybbR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00345___ybbR-BSU01760___ybbR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00345___ybbR
# 2: BSU01760___ybbR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1455
# Identity:    1436/1455 (98.7%)
# Similarity:  1436/1455 (98.7%)
# Gaps:           3/1455 ( 0.2%)
# Score: 7105.0
# 
#
#=======================================

BSNT_00345___      1 ATGGATAAATTCTTAAACTACCGCTGGGCTGTGAAAATCATTGCTCTGCT     50
                     ||||||||||||||||||.|||||||||||||||||||.|||||||||||
BSU01760___yb      1 ATGGATAAATTCTTAAACAACCGCTGGGCTGTGAAAATTATTGCTCTGCT     50

BSNT_00345___     51 TTTCGCGCTCTTGCTTTATGTGGCGGTTAACAGCAACCAAGCACCGACTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb     51 TTTCGCGCTCTTGCTTTATGTGGCGGTTAACAGCAACCAAGCACCGACTC    100

BSNT_00345___    101 CGAAAAAACCGGGTGAATCTTTCTTTCCGACATCAACAACTGATGAAGCA    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    101 CAAAAAAACCGGGTGAATCTTTCTTTCCGACATCAACAACTGATGAAGCA    150

BSNT_00345___    151 ACTCTGACTGATATTCCGGTTAAAGCGTATTATGATGATGAAAATTACGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    151 ACTCTGACTGATATTCCGGTTAAAGCGTATTATGATGATGAAAATTACGT    200

BSNT_00345___    201 CGTAACGGGTGTTCCGCAAACGGTTAATGTCACGATAAAAGGCTCGACAA    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    201 CGTGACGGGTGTTCCGCAAACGGTTAATGTCACGATAAAAGGCTCGACAA    250

BSNT_00345___    251 GCGCCGTGAAAAAGGCTCGGCAGACCAAAAACTTTGAAATATATGCTGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU01760___yb    251 GCGCCGTGAAAAAGGCTCGGCAGACCAAAAACTTTGAAATATATGCCGAT    300

BSNT_00345___    301 ATGGAACATTTGAAAACCGGCACACATAAGGTTGAGCTTAAGGCCAAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    301 ATGGAACATTTGAAAACCGGCACACATAAGGTTGAGCTTAAGGCCAAAAA    350

BSNT_00345___    351 CGTGTCGGATGGGATGACAATCTCAATTAATCCGTCTGTTACGACAGTGA    400
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU01760___yb    351 CGTGTCGGATGGGCTGACAATCTCAATTAATCCGTCTGTTACGACAGTGA    400

BSNT_00345___    401 CCATTCAGGAACGGACGACCAAAAGTTTTCCCGTAGAAGTGGAGTACTAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    401 CCATTCAGGAACGGACGACCAAAAGTTTTCCCGTAGAAGTGGAGTACTAC    450

BSNT_00345___    451 AACAAAAGCAAGATGAAAAAAGGCTATTCTCCGGAGCAGCCGATTGTCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    451 AACAAAAGCAAGATGAAAAAAGGCTATTCTCCGGAGCAGCCGATTGTCAG    500

BSNT_00345___    501 TCCGAAAAATGTGCAGATTACCGGATCGAAAAATGTCATCGATAATATTT    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU01760___yb    501 TCCGAAAAATGTGCAGATTACCGGATCGAAAAATGTGATCGATAATATTT    550

BSNT_00345___    551 CTCTTGTAAAAGCTTCAGTGAATTTGGAAAACGCAGATGAAACGATTGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    551 CTCTTGTAAAAGCTTCAGTGAATTTGGAAAACGCAGATGAAACGATTGAA    600

BSNT_00345___    601 AAGGAAGCGAAAGTGACTGTCTATGATAAAGACGGAAACGCGCTTCCTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    601 AAGGAAGCGAAAGTGACTGTCTATGATAAAGACGGAAACGCGCTTCCTGT    650

BSNT_00345___    651 CGACGTGGAGCCCTCGGTCATCAAGATTACCGTTCCGGTGACAAGTCCGA    700
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU01760___yb    651 CGACGTGGAGCCCTCGGTCATCAAGATTACCGTTCCGGTGACAAGCCCGA    700

BSNT_00345___    701 GTAAAAAAGTGCCCTTTAAAATTGAACGGACAGGAAGCCTTCCTGACGGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    701 GTAAAAAAGTGCCCTTTAAAATTGAACGGACAGGAAGCCTTCCTGACGGT    750

BSNT_00345___    751 GTCAGCATAGCGAATATTGAATCCAGCCCCAGTGAAGTAACGGTTTACGG    800
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU01760___yb    751 GTCAGCATAGCGAATATTGAATCCAGCCCCAGTGAGGTAACGGTTTACGG    800

BSNT_00345___    801 CTCACAGGATGTGTTGGATTCTCTTGAATTTATTGACGGCGTCAGCCTAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    801 CTCACAGGATGTGTTGGATTCTCTTGAATTTATTGACGGCGTCAGCCTAG    850

BSNT_00345___    851 ATTTAAGTAAAATTAACAAGGATTCCGATATCGAGGCAGATATTCTGCTT    900
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU01760___yb    851 ATTTAAGTAAAATTAACAAGGATTCCGATATCGAGGCAGATATTCCGCTT    900

BSNT_00345___    901 CCTGACGGTGTCAAAAAAATCTCACCGTCAAAGGTGACTTTGCATATAGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    901 CCTGACGGTGTCAAAAAAATCTCACCGTCAAAGGTGACTTTGCATATAGA    950

BSNT_00345___    951 AGTCGATAGTGAAGCGGATCAGAAGTTCGAGAATGTCCCTATCAAGACTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb    951 AGTCGATAGTGAAGCGGATCAGAAGTTCGAGAATGTCCCTATCAAGACTG   1000

BSNT_00345___   1001 TAGGGCTGAGCAGCTCACAAAACATTGAATATCTTGATCCTGAATCACAA   1050
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU01760___yb   1001 TAGGGCTGAGCAGCTCACAAAACATTGAATTTCTTGATCCTGAATCACAA   1050

BSNT_00345___   1051 GCGATAGACGTAACGGCTAAAGGCTCTCCCGCGAATATAAAAAAACTGAA   1100
                     ||||||||.|||||||||||||||||||||.||||||||||.||||||||
BSU01760___yb   1051 GCGATAGATGTAACGGCTAAAGGCTCTCCCACGAATATAAATAAACTGAA   1100

BSNT_00345___   1101 AAAATCAGATATTGAATTGTATGTGAATGTTTCAGATTTAGAGGACGGGG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb   1101 AAAATCAGATATTGAATTGTATGTGAATGTTTCAGATTTAGAGGACGGGG   1150

BSNT_00345___   1151 AGCATAGCGTGAAGCTTGAAGTGAACGGGCCACAGAATGTAACCTGGTCC   1200
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU01760___yb   1151 AGCATAGCGTGAAGCTTGAAGTGAACGGGCCACAGAATGTAACTTGGTCC   1200

BSNT_00345___   1201 TTGGGGCGGAAAAACGCCAAAATCAAGCTGACGTCTAAGAAAAGCAATAC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb   1201 TTGGGGCGGAAAAACGCCAAAATCAAGCTGACGTCTAAGAAAAGCAATAC   1250

BSNT_00345___   1251 ATCAACGAATGATAACAGCAGCAATACATCAGGGAACCAGGATGACACAG   1300
                     ||||||||||||||||||||||||||||||||||||||||   |||||||
BSU01760___yb   1251 ATCAACGAATGATAACAGCAGCAATACATCAGGGAACCAG---GACACAG   1297

BSNT_00345___   1301 ATAAACAAACAAATGATCAAAAGAACAATCAGCAAGAAGATACAAAGAAC   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb   1298 ATAAACAAACAAATGATCAAAAGAACAATCAGCAAGAAGATACAAAGAAC   1347

BSNT_00345___   1351 ACTGATAAAAACAACAACGATCAAAACCAAGACGAAAATAAAGATCAAAA   1400
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU01760___yb   1348 ACTGATAAAAACAACAACGATCAAAACCAAGACGGAAATAAAGATCAAAA   1397

BSNT_00345___   1401 CCAAGATCAGGATGAGGATGAATCCACTGCGAATTCACAATCCTCATCGG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01760___yb   1398 CCAAGATCAGGATGAGGATGAATCCACTGCGAATTCACAATCCTCATCGG   1447

BSNT_00345___   1451 AATAA   1455
                     |||||
BSU01760___yb   1448 AATAA   1452


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.